LOCUS CCD73108.1 751 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Glutamate carboxypeptidase 2 homolog protein. ACCESSION BX284606-61 PROTEIN_ID CCD73108.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="gcp-2.1" /locus_tag="CELE_R57.1" /standard_name="R57.1c" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00020082" /db_xref="EnsemblGenomes-Tr:R57.1c" /db_xref="GOA:G8JYE4" /db_xref="InterPro:IPR003137" /db_xref="InterPro:IPR007365" /db_xref="InterPro:IPR007484" /db_xref="InterPro:IPR036757" /db_xref="InterPro:IPR039373" /db_xref="UniProtKB/TrEMBL:G8JYE4" /db_xref="WormBase:WBGene00020082" intron_pos 40:1 (1/11) intron_pos 145:1 (2/11) intron_pos 230:1 (3/11) intron_pos 276:0 (4/11) intron_pos 313:1 (5/11) intron_pos 344:2 (6/11) intron_pos 405:1 (7/11) intron_pos 453:2 (8/11) intron_pos 576:2 (9/11) intron_pos 671:2 (10/11) intron_pos 714:0 (11/11) BEGIN 1 MVKAYIAIAA SLIFVFCIAA LGVHHSERKF NKFNKVSIDD IHKSDAGVIQ DNIKTENIKK 61 YLRIFTKDPH VAGTEANKKV AYEIANAWSE AGLEDVHTLP YEVLLSYPDF ENPNSVIIKS 121 SAGKEVFKSK GVSPVIIPDE QSGKYAGHQW LAYAGNGSAS ADVVYINHGT ANDFKNLKLM 181 GVDIKGKIAL MRYGHGFRGD KIHKAQQAGA IGAILFSDTQ DVAQDGVESE NVYPKKIWMP 241 NEGVQRGSLM HGDGDALSPY YPSKKELFKG RTIEEAKEDG VLPSIPVLPV SYTTGYEILK 301 RLSGRPAPSD WQGFVGGNLT YKLGPGFVNG EKLSINVHSE LRTKRIRNVI GYIRGSEEPD 361 SYIMLGNHFD AWVYGSIDPN SGTAVLAEVA RAMMQTINET SWKPARTIVF NAWDAEEFGL 421 IGSTEFVEEF VNILQKRAVV YINMDCIQGN ISLHVDTVPI LEHAVIEASK QVENPSKRER 481 SRGRKTLYDT WMKVFPDKKA GVPKIRVPGG GSDHAPFLNF AGVPVINFTF KNYTTWDTYP 541 LYHTMYETPF SNIHLLDTDN LSVHKAIGQY WAELAKTFAD DVILPMNTTH FASVMLKTYL 601 PQLKTTISGI NVSRSDFEDI RTQYALLSKS AQDLLTMSKK FQETIHFTQH SFSQNPYDPK 661 HVNAVNERLK STERCFINPR GVSMHNPSAR HVLFSVSDSD SYSSSLMAGV QNAINSYDLN 721 PTKKGLREII NQISIVQYSV ICVVNTLRDV I //