LOCUS CCD73106.1 770 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Glutamate carboxypeptidase 2 homolog protein. ACCESSION BX284606-60 PROTEIN_ID CCD73106.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="gcp-2.1" /locus_tag="CELE_R57.1" /standard_name="R57.1a" /note="Confirmed by transcript evidence" /db_xref="WormBase:WBGene00020082" intron_pos 11:1 (1/12) intron_pos 59:1 (2/12) intron_pos 164:1 (3/12) intron_pos 249:1 (4/12) intron_pos 295:0 (5/12) intron_pos 332:1 (6/12) intron_pos 363:2 (7/12) intron_pos 424:1 (8/12) intron_pos 472:2 (9/12) intron_pos 595:2 (10/12) intron_pos 690:2 (11/12) intron_pos 733:0 (12/12) BEGIN 1 MPYVGVGAQT VSTSLTGAPM VKAYIAIAAS LIFVFCIAAL GVHHSERKFN KFNKVSIDDI 61 HKSDAGVIQD NIKTENIKKY LRIFTKDPHV AGTEANKKVA YEIANAWSEA GLEDVHTLPY 121 EVLLSYPDFE NPNSVIIKSS AGKEVFKSKG VSPVIIPDEQ SGKYAGHQWL AYAGNGSASA 181 DVVYINHGTA NDFKNLKLMG VDIKGKIALM RYGHGFRGDK IHKAQQAGAI GAILFSDTQD 241 VAQDGVESEN VYPKKIWMPN EGVQRGSLMH GDGDALSPYY PSKKELFKGR TIEEAKEDGV 301 LPSIPVLPVS YTTGYEILKR LSGRPAPSDW QGFVGGNLTY KLGPGFVNGE KLSINVHSEL 361 RTKRIRNVIG YIRGSEEPDS YIMLGNHFDA WVYGSIDPNS GTAVLAEVAR AMMQTINETS 421 WKPARTIVFN AWDAEEFGLI GSTEFVEEFV NILQKRAVVY INMDCIQGNI SLHVDTVPIL 481 EHAVIEASKQ VENPSKRERS RGRKTLYDTW MKVFPDKKAG VPKIRVPGGG SDHAPFLNFA 541 GVPVINFTFK NYTTWDTYPL YHTMYETPFS NIHLLDTDNL SVHKAIGQYW AELAKTFADD 601 VILPMNTTHF ASVMLKTYLP QLKTTISGIN VSRSDFEDIR TQYALLSKSA QDLLTMSKKF 661 QETIHFTQHS FSQNPYDPKH VNAVNERLKS TERCFINPRG VSMHNPSARH VLFSVSDSDS 721 YSSSLMAGVQ NAINSYDLNP TKKGLREIIN QISIVQYSVI CVVNTLRDVI //