LOCUS CCD72623.1 2314 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Carboxypeptidase protein.
ACCESSION BX284606-1476
PROTEIN_ID CCD72623.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="ctsa-2"
/locus_tag="CELE_K10C2.1"
/standard_name="K10C2.1"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00019617"
/db_xref="EnsemblGenomes-Tr:K10C2.1"
/db_xref="GOA:Q94269"
/db_xref="InterPro:IPR001563"
/db_xref="InterPro:IPR018202"
/db_xref="InterPro:IPR029058"
/db_xref="InterPro:IPR033124"
/db_xref="UniProtKB/TrEMBL:Q94269"
/db_xref="WormBase:WBGene00019617"
intron_pos 59:2 (1/20)
intron_pos 234:2 (2/20)
intron_pos 259:0 (3/20)
intron_pos 298:2 (4/20)
intron_pos 363:0 (5/20)
intron_pos 569:1 (6/20)
intron_pos 694:0 (7/20)
intron_pos 742:0 (8/20)
intron_pos 782:2 (9/20)
intron_pos 928:2 (10/20)
intron_pos 1252:0 (11/20)
intron_pos 1300:0 (12/20)
intron_pos 1340:2 (13/20)
intron_pos 1401:2 (14/20)
intron_pos 1457:0 (15/20)
intron_pos 1872:2 (16/20)
intron_pos 1981:0 (17/20)
intron_pos 2029:2 (18/20)
intron_pos 2055:2 (19/20)
intron_pos 2167:0 (20/20)
BEGIN
1 MLRSLGILCL LGAALAAPSR IASKDTDLVN DLPGLSFTPT FKQYSGYLDG SQGNHLHYWL
61 VESQTNPQTA PIVLWLNGGP GCSSLLGLLS ENGPYRIQKD GVTVIENVNS WNKAANVLFL
121 ESPRDVGFSY REKSATPDLL YNDDKTATDN ALALVQFFQR FPEYQGRDFY ITGESYGGVY
181 VPTLTKLVVQ MIQNNTTPYI NLKGFAVGNG ALSRKHLTNS GIDLLYYRGM LGTTQWENLR
241 QCCPDTLNNP LVDCDYSKYV VFDNFGNPSP RNDTNDAQAI ACGKMVINLS LNSIWETYND
301 VYNSYQDCYN FDSSVFGAAE ERHAKVHQQT MRKIMRTTLS TTGANDAYNL FSNGFNPFID
361 QGSLYNKMST DALNNYPCYI DDATTAWLGR TDVRSALHIP AAAPVWQECS DDINAKYYIQ
421 QYPDTTPVFQ FLVDSGYPLK VLIYNGDVDL ACNYLGDQWF VENLATVSYQ MTLTTPRQQW
481 NFTRAGTQNK YIPTLAGYLK SWNYQQFSID LLTVKGAGHM VPMDRPGPAL QIFYNYLYNT
541 NGGYSNQVPY DLTATPLRSQ FLAPPQKTWT RKQADRVWNL PGITYGLNFK QYSGYLNGVT
601 GNYLHYWFVE SQGNPTTDPL VLWLTGGPGC SGLMAMLTEL GPFHPNPDGK TLFENVYSWN
661 KAANVIFLES PRGVGFSVQD PSLNNDTIWD DQRTATDTYL ALKDFLTVYP EYINRPFFVT
721 GESYGGVYVP TITSLLIDKI QSGDFAQLNL VGMSIGNGEL SAIQQFNSAI MMSYFHGLFS
781 KDDFDSLQPC CNQTKTSSQW FEYCNFAQYI HLGPDGTAIP NDKSFCANKV ADLGQQRFWN
841 SLNDVYNIYQ DCYQQADRAF GSRMSIKQKK EHMRGFIDQG AKISTSSTDN QGGLACYGTT
901 QAANWINLPD VRSALHVSSA AGAWSACNDT INGLYVQQHN DTTSVFQHIL DSKYPLRVLI
961 YNGDVDQACN YLGDQWFIEA FALKNQLPVT KPRADWRYMT QIAGYAKKFD NNAGFSVDLI
1021 TVKGAGHLVP TDRPGPALQM IANFFRNQDY SNPTVIDTTL HPLKNTYVVA EQLAASLNRS
1081 STGVAHNGNR VHVKVHKVVR AGNFAKTGEQ DTVRQPTERD APPPPPTQTK AQDEVTNLPG
1141 LTFTPNFKQY SGYLNASAGN YLHYWLVESQ LNATYDPLIL WLNGGPGCSS IGGFLEELGP
1201 FHVNADGKTL FENTFSWNKA GNVLFLEAPR DVGYSFRSNE FAPDTMYNDT YTASDTVLAL
1261 ASFFNKFPEY QNRPFYITGE SYGGIYVPTL TRALINAIQT GTIKNVNLVG VAIGNGELSG
1321 IQQINSAVSL LYFRGERDKS DWDAISKCCD TSVPQAYCDY IKYVNIDTSG NVWPKVNDNS
1381 LAGQCGQLVT QQGFLDVWTT DNDVYNTFAD CYTAPGAGDS KLNELASGIR RVQNRRSKRA
1441 ADVSPFLPST LFVDQAKKIN YQSTDANGGF TCFSGASSEN YMNLPEVRTA LHIPTSLPYW
1501 TDCNDNMNEN YIQQHNDTSS VFTDIFATGY PLRFLIYNGD VDMACQFLGD QWFLEKLAKD
1561 NGLAVTRQHG PWNYTQGQFL PRVGGYWKQF TYTNTAKNTK VVFDQLTVKG AGHFVPQDRP
1621 GPALQMIYNF VNQLDYNRNL TLDYSRKQLL PQYQPAPVTV PRRKADHIFS LPGVTWNVNF
1681 MQHSGYLQAT RGNKLFYWFV ESQSGNEGDP IILWLQGGPG CASTGGLFSE IGPFFVNPDG
1741 ETLFENIYSW NKAAHILIID SPRGVGFSYQ DKNVNNDTTW DDDKTALDTY TALEDFFVTY
1801 PPHRNSELYI TGESYGGVYV PTLTRLLIQK IQAGQSNIQL RGMGIGNGMV SAVNDVRTLP
1861 DFLYFHGIYD KPMWEKLRAC CPSADSSGDC NYDYYITIDS GVNVIAKQFP NNQTLQDCAN
1921 LVENLSYDRN WKALYDQYNL YQDCYVTPRD QANPFAMKEK FSRLDVDHKL KTSIPQAITK
1981 TAPQDPLSTD ATGGYSCWSL GAINNYLSLS HVRDALHIPD SVPRWGFCNK INYANLYNDT
2041 TQVFTDILNS GYNLKVLIYN GDVDSVCSMF EAESMINNFA AAQTFVSNQP RGSWMYGGQI
2101 GGYVQKFQKN NMTIDLLTVK GAGHMSPTDR PGPVLQMMNN FVHGQGNYNT SIAVSMVRQP
2161 LLAQFLEQGI GPVGTSAPVA STSTTNTPSP TNQSPVTQAP PVTLPPPSVA TAGPTGPILT
2221 VVPVSSAPTS GAVSSTTNTP SPTNQSPVTL PPPSVATAGP TGPILTVVPV SSAPTSGAVS
2281 STATAAPVIT TTKTSSVLSV SFSMFIVLIT KFLL
//