LOCUS       CCD72282.1               703 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Synaptogenesis protein syg-1 protein.
ACCESSION   BX284606-533
PROTEIN_ID  CCD72282.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="syg-1"
                     /locus_tag="CELE_K02E10.8"
                     /standard_name="K02E10.8a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="GOA:B1Q236"
                     /db_xref="InterPro:IPR003598"
                     /db_xref="InterPro:IPR003599"
                     /db_xref="InterPro:IPR007110"
                     /db_xref="InterPro:IPR013098"
                     /db_xref="InterPro:IPR013162"
                     /db_xref="InterPro:IPR013783"
                     /db_xref="InterPro:IPR036179"
                     /db_xref="PDB:4OF0"
                     /db_xref="PDB:4OF3"
                     /db_xref="PDB:4OF6"
                     /db_xref="PDB:4OF7"
                     /db_xref="PDB:4OFY"
                     /db_xref="UniProtKB/Swiss-Prot:B1Q236"
                     /db_xref="WormBase:WBGene00006365"
     intron_pos      50:0 (1/15)
     intron_pos      91:0 (2/15)
     intron_pos      126:1 (3/15)
     intron_pos      192:1 (4/15)
     intron_pos      232:2 (5/15)
     intron_pos      257:0 (6/15)
     intron_pos      319:0 (7/15)
     intron_pos      355:1 (8/15)
     intron_pos      404:2 (9/15)
     intron_pos      440:1 (10/15)
     intron_pos      491:0 (11/15)
     intron_pos      544:1 (12/15)
     intron_pos      587:1 (13/15)
     intron_pos      622:0 (14/15)
     intron_pos      664:2 (15/15)
BEGIN
        1 MVRWQTWPLL LLFQLVTCQQ LQQRIVEAPK DTLAAVGETA ILTCRVEHQQ GPVQWMKDDF
       61 GLGTDRDKPL PGNKRYRMVG SAANGEYNLE ISNVTLFDDD DFACQISESD HAKAVVSSKA
      121 KLTVLVRPTP PKIVKSHHSL KAIAGDPITQ SCLSRKGKPP PTIGWAIASD EHGKHIVSWL
      181 GESRSKFGGI HAKPEISQET VIAHVNETTQ VEEGGNNSRE DSSIYSIMSN LSFIPRPEDD
      241 HKYLICISQH MTFPNKIEVD SVKLSLRYAP QINLTVASKL PLRENGSALL ACNVNAKPLD
      301 NVKISWYKGN QKLRETGDTL TFETLKMEDH NRDIFCEATN EIGTTRGSIK LNVAFGARIM
      361 STSQDKEVNE GDNAFFHCAT LANPAPAIFW TRGDSDEIIG HGENLTLENV RTWQQGNYNC
      421 TATVEGFRKQ ILSHYLHIRG PPTVSMKDEV SASLDEATEI ICEISGRPKT NNVRWTVNGK
      481 EINFNNGRIT VHQYPKPYGK ESILKIKDLK EEDFGVYNCS ANNGLGFDNR GTLLKKRNIL
      541 DWIVITAKFD RMVALAIISA GVLLVSLLCC LCMCRSNCRS RKSKFIDDQS DVTVKCEALD
      601 GQYFPEMYSS SPVDNVHLST KDYISIPQNN PDLDFLGATG SFGPPGGLYP KCFNNSANEY
      661 IYNRYVRRGD ERQIAGYGDA TGSGDSQNVQ LQLPLVAGSG PTN
//