LOCUS       CCD71836.1               465 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans glycerophosphocholine cholinephosphodiesteras
            e protein.
ACCESSION   BX284606-552
PROTEIN_ID  CCD71836.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="T03G6.3"
                     /locus_tag="CELE_T03G6.3"
                     /standard_name="T03G6.3"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00020195"
                     /db_xref="EnsemblGenomes-Tr:T03G6.3"
                     /db_xref="GOA:Q22129"
                     /db_xref="InterPro:IPR002591"
                     /db_xref="InterPro:IPR017850"
                     /db_xref="UniProtKB/TrEMBL:Q22129"
                     /db_xref="WormBase:WBGene00020195"
     intron_pos      47:1 (1/9)
     intron_pos      79:1 (2/9)
     intron_pos      106:1 (3/9)
     intron_pos      143:0 (4/9)
     intron_pos      228:0 (5/9)
     intron_pos      270:0 (6/9)
     intron_pos      292:0 (7/9)
     intron_pos      321:0 (8/9)
     intron_pos      352:0 (9/9)
BEGIN
        1 MNLVLILLGL VLGSAARDPI GQNLIVILAD GYGATLLNNT KPDATFGIRH LATNGVQVDY
       61 VTPSFPTHTW PQWMSLSTGL YTENHGFTAD YMWDRKTNFT FERGTGPNDT EDVWWDDAKA
      121 PLWYTAGKAG VDVHCYWFAH CHRAFYDMVV QVPEKRWANL DDQHQTDNLR DIFPEIANRI
      181 SKYQVYKQQM FLIRYANIGN AQKEHGPESD EVEQEVARFD LYINELQQLL EDRGLFSSTN
      241 LVVMSDHGYT PLQKEEQFFM EQCLPDYSLV KKVVNSHSMI MVFTNPEDEG TVHYEFSVCE
      301 VWSPMGDYDE NDTPFVKTYR MSELPDDLHW KNSRFMSGVV LITKPGTSVV TKELPTVPHS
      361 GDPTIDAKQA SGWEPYHDDM KGIFVARGPA FRENERFGPI EIVDVYQMLL NILSIEPAHP
      421 HNGTWTNVEN MLSEGWENRG PVDSSAFRSS GTLLCSIFVL LHFFF
//