LOCUS CCD71422.1 955 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans RING-type domain-containing protein protein. ACCESSION BX284606-864 PROTEIN_ID CCD71422.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="T22B2.1" /locus_tag="CELE_T22B2.1" /standard_name="T22B2.1" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00020665" /db_xref="EnsemblGenomes-Tr:T22B2.1" /db_xref="GOA:O45195" /db_xref="InterPro:IPR001841" /db_xref="InterPro:IPR013083" /db_xref="UniProtKB/TrEMBL:O45195" /db_xref="WormBase:WBGene00020665" intron_pos 91:0 (1/6) intron_pos 173:0 (2/6) intron_pos 267:0 (3/6) intron_pos 670:2 (4/6) intron_pos 699:2 (5/6) intron_pos 727:2 (6/6) BEGIN 1 MFIDPVEFFM ISSTSLKKLI CHYFPKELLP TKWECTDKNP LKNIQNLIDA SNGKLMVYGS 61 AREIYDNLNL FRRFPGSHHK FQFDTTEVYT KEPIFYQSMK RIPYIYKQDY FVILQSIIST 121 SPLRKFETEF SLATITAYLK MKELSLPALN EMVPYCAVSA ALLQTGIQDI QHKFNDYLEN 181 PLLQLEFKKH TFEELFVQWK QINPLFEMES IHDSLQDLLK KFIARNPIRD NEDVFKRVFA 241 WSQLVVLQLD IFVRDCETLF KPKPSTKPIV RIFDDKPNKL IMAYELLDAM KQAQMDVSKL 301 EEEVLEMPEL STFTYQQVAS RISPQDMRTI EFVITPITVA KYAATPIPTI NKGEYCILAS 361 DFLFNLLGNM ITAKKMFQRI EPSQLNVIRE FFNFVDNHFD FTYGIQFIDL ELVEMINSEL 421 DTFHRMLTIS SKGPSDIRDR QQEGFTKTDL SNELKHLKLD LIFPEICELS EFYFVHLTKT 481 LKIEKLSTSD VYGIVEHLQI DCLARRFPKL AEFIHSQLVC SRIFGYQCQK CFQPKEPKVA 541 GVEAVEIESK KELTIDDSAE TMKRKITLEF ANKVKETLAQ LSDLKNEKPK KSKKQKPSQQ 601 LVPEKVKSNP DPCQKCFRTS EYHNKTKEDF RLEKIETKRL RKALKESQKE SEEKSQNIAE 661 KDQEMLLLKE HVESIQREFL KYKSDMNNVN NETIRLQTTQ LLEHQQALAQ KSLEVIEQKD 721 EILHLKAQNQ SQQTVIAQQE KSIKSLKEKS QQLEEKRSIT NNTQRLLEET EIIHKILVDT 781 LKAQEIFESE SPLNKITVMT SRICETSQDP ETKSIAKREF RYFARQIEGY RRSLKKRINS 841 MKNETIRSDD IPELREFPTF SDEFVKAYKD TLKKDAPLIC APLLKLPETI KSDELDDKEC 901 LVCLEDMVKN QDTVKCSTCK RQYHTTCVQK WFKIKRICPT CNAGLLDENE FPALS //