LOCUS CCD71068.1 738 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans C2H2-type domain-containing protein protein. ACCESSION BX284606-3945 PROTEIN_ID CCD71068.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="T20F7.1" /locus_tag="CELE_T20F7.1" /standard_name="T20F7.1" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00020630" /db_xref="EnsemblGenomes-Tr:T20F7.1" /db_xref="GOA:O02169" /db_xref="InterPro:IPR013087" /db_xref="UniProtKB/TrEMBL:O02169" /db_xref="WormBase:WBGene00020630" intron_pos 74:0 (1/10) intron_pos 116:1 (2/10) intron_pos 198:0 (3/10) intron_pos 305:2 (4/10) intron_pos 355:0 (5/10) intron_pos 382:2 (6/10) intron_pos 428:2 (7/10) intron_pos 511:0 (8/10) intron_pos 563:0 (9/10) intron_pos 684:0 (10/10) BEGIN 1 MYPAIPKQHS AEVYPMNLSD EEIDVINSGD DDEEIMRGEQ YRHPGEVFMV NEEESIYDDD 61 GSIQYEEYIE EDGTYDMNQQ YGVENQEYVD AHYINTNEEY LTGKEHEMVY QLFGNTATVE 121 PISTEKRLEK YPELKHLPSL RRPTKFTEIK DRPKTHESKS GRTLDPDSSA LHSLLAANKF 181 YPTVDKPVPD QKLQENKEQD PATYINQSRL TTSKPVSKAQ VPPRKGYKPR PSCPEPKDAH 241 LIPLAHLTPL PDRYFQRRLT ITAFQAGFSS ECVSCMYCNF VFRQKALLES HIKKHTTTGK 301 NEVMSESSGL ICPVEHCTIR CDSIATVVRH MQVTHSVNNI AFERVVFKNF HEFKMWRTEL 361 ERLTMSKFSR TSGKTNKFSK STYYQCQHSG KIPSVKSEKE YRKQRTRVSK KLGKTCTAFF 421 HVRENDDGTV LLRGCTKHCG HGRNVQELPV TDDIKLEISN MLISGLDESA IVDKMREEND 481 ASDRRYYLQN YEVRNVAIKI EKYKDLYKKK IGTGEPMLQL ADFISSKGIK NRPVYPVVKA 541 KLARCRFPVV DKPLVEKQFD VEARTAAYQE YREECEQEHA VNTYEEVVEE DGLFHVPATP 601 GIEVYDESEK ALEVTEKKEE PVEPLTETPT KTRGRRKTTA DEVAVPAESE KVPAPQEMEE 661 TAEQVGSPTI PIGRNTARKN AAKKVKIDTS IVVQSDEDME HVAEEIIEET TSCNVIVSPT 721 RASYRLKLKK AVKTAAKD //