LOCUS       CCD70868.1               941 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Lethal giant larvae homologue 2
            domain-containing protein protein.
ACCESSION   BX284606-188
PROTEIN_ID  CCD70868.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="lgl-1"
                     /locus_tag="CELE_F56F10.4"
                     /standard_name="F56F10.4"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00018987"
                     /db_xref="EnsemblGenomes-Tr:F56F10.4"
                     /db_xref="GOA:G5EEI1"
                     /db_xref="InterPro:IPR000664"
                     /db_xref="InterPro:IPR013577"
                     /db_xref="InterPro:IPR036322"
                     /db_xref="UniProtKB/TrEMBL:G5EEI1"
                     /db_xref="WormBase:WBGene00018987"
     intron_pos      30:0 (1/13)
     intron_pos      109:1 (2/13)
     intron_pos      146:1 (3/13)
     intron_pos      226:0 (4/13)
     intron_pos      291:2 (5/13)
     intron_pos      343:1 (6/13)
     intron_pos      405:0 (7/13)
     intron_pos      482:0 (8/13)
     intron_pos      646:1 (9/13)
     intron_pos      732:1 (10/13)
     intron_pos      810:0 (11/13)
     intron_pos      861:1 (12/13)
     intron_pos      897:0 (13/13)
BEGIN
        1 MSSILRFIRS KFYHEPEEHA IEQYAVFDEG NRGGFTSDVV AFDYHNGCVV IGSKNGEVTF
       61 YGYRGASWTV SLSKDSENKA RIEHIFFISS NIALVLCDGQ LIIPIHIKDG VITKKEELRF
      121 NENHKSKWDI THVQKLSDDT FALVFSMNNT IYRIKSKTLK SEVLVKAEDF EKWLPDDTEL
      181 ASITCLPEKP SILMLIAENG CVGVFNESQF VMKTSLRNYE DEAIQKLHWS SEKKKNVAFG
      241 ISCNNKYTKW EFTVGKDCQI SAQEVNVYSA NQFGPYPCHQ IRHFSVCADA SDPNENFLIY
      301 QGGKSSGKYD DRDLITISHG DFVEKLELSS EIVGIVGVSG SYEDCKKSGV VLICTKCEII
      361 GIDLERESLN MMQPKHFLSI NNSTPTTHSR AIEIEENVWN RLESASKSYW ETNQMSTRDW
      421 PLNFQKKIVT DANHQRASYR QVYLSGHSNG NICIWSSGGV GMSLMLVIRT SLEFDGASSF
      481 DNEDSNYYNS DEKPEKPVRK IGLYDPFDDD EEMCITRVHF DPKSGIVIGT NRGGYVLMYE
      541 LWDSARTLTH WEATPISCNN SPPDTRKRAL KPRKAELKYN AGYQIRLKNE SDLPLVFSMH
      601 PSHRITDIVY LHKYHCLAVG SNFGIVMLDV NFGYLVYANS FNDDNNDSSN VSANQFQRFK
      661 SLKKSLRKTF RRKKKGTETL MDSGGAVASS SNHVQHETSP KRIDDFEEEE VFMERPIEAR
      721 EELGVLDCYA ENSKGTVTCL RMMRFPVLDD KNVDDIIAVG LHEGSVYFYA ISEHDVGLRM
      781 TFKAEQIKKL SIPHKQPVVN LDITNEEGYF SASTRIVVIT EEQLRIYNCQ PMVKRDSYKI
      841 TALEGLKIKN GMVARILNKK NSNNFESFVV LVANDGSLRV HSVQKASSFE SRKFIDPIDV
      901 MALNSSCLSR DGDVAFLIKS SELQRSTVNL NFRGWSSTHK S
//