LOCUS       CCD70626.2               761 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans MAM domain-containing protein protein.
ACCESSION   BX284606-193
PROTEIN_ID  CCD70626.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="mam-1"
                     /locus_tag="CELE_ZC13.3"
                     /standard_name="ZC13.3"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00022504"
                     /db_xref="EnsemblGenomes-Tr:ZC13.3"
                     /db_xref="GOA:Q95Q40"
                     /db_xref="InterPro:IPR000998"
                     /db_xref="InterPro:IPR013320"
                     /db_xref="UniProtKB/TrEMBL:Q95Q40"
                     /db_xref="WormBase:WBGene00022504"
     intron_pos      20:0 (1/13)
     intron_pos      52:2 (2/13)
     intron_pos      86:1 (3/13)
     intron_pos      168:0 (4/13)
     intron_pos      210:0 (5/13)
     intron_pos      330:1 (6/13)
     intron_pos      394:1 (7/13)
     intron_pos      431:0 (8/13)
     intron_pos      535:2 (9/13)
     intron_pos      557:2 (10/13)
     intron_pos      582:1 (11/13)
     intron_pos      668:1 (12/13)
     intron_pos      713:0 (13/13)
BEGIN
        1 MSQLASAHSQ NTIVSKILQV ALGLFVTTSD LPPLSPNHEQ LSYDCSFHSD CRWMSLGNNV
       61 DRWRVAKGEP DSLLWLAATG TMQIPREPYA LIESRGNPVD ALVTDAIRCQ MGYAELSFTY
      121 WVIGNADIEI CLTDLEGGKF NCTGVLNSSI MPGKVSLKIP ELQKPFRIMI QPSSDPGVVV
      181 LDDIRYDASI CHPDTSPETN SVRGRPDFMT TSPPKRIRPW TVKQTKKPKP TEVVPVKEIE
      241 EETTTTTTTT TTTQLPTTTT TEEITTTMPS GPTTEVPFDL LIVGNRTRPL NDRRSGEIVD
      301 DSTQLLCDFN NEFACRWGPE AGRWAIIDSG AIPSLEDSIA DPLLLPTFPA GLVLQGTAML
      361 SSDPIQCQTG NAKVLFRYWS NGDILLQVCA LGHGDNNDII HCVEQSRSAR HERNTLAVFE
      421 LNKDITGTFT LNIVPQWESG LKNRFLVIDE IAYIGQCDKS KLEPTSQAPL ILGRTTQPKE
      481 VTIAGTKRRI QTTPTPTTTT TQVPEIEEEE VVEEEETTTT RRWPTTTTSG YTKKRRIFTT
      541 FAPVFPEEVY TQTSKPRKST WTTTPEPKQD DYCDILNCSF DDTACNYLNH GLTKKPWTLR
      601 NRGYGYPLTG TTDIRATQTN GQFVSAILDA EDIAILESPK FNATRSLNVL LFQYFRPSQM
      661 TTIRLCLGSR YTNPMRTVSS FVQCPSILRS VTSKNAYRWN TVHIQLPPGT THFYLVAHSS
      721 EKSESRAAIA IDNMRVAICD TRGFAPDYID ETTDFQSVLQ L
//