LOCUS       CCD69983.1               624 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans ShKT domain-containing protein protein.
ACCESSION   BX284606-169
PROTEIN_ID  CCD69983.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="F25E2.2"
                     /locus_tag="CELE_F25E2.2"
                     /standard_name="F25E2.2a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00017780"
                     /db_xref="EnsemblGenomes-Tr:F25E2.2a"
                     /db_xref="UniProtKB/TrEMBL:G4SF79"
                     /db_xref="WormBase:WBGene00017780"
     intron_pos      54:1 (1/10)
     intron_pos      94:1 (2/10)
     intron_pos      133:1 (3/10)
     intron_pos      159:0 (4/10)
     intron_pos      188:1 (5/10)
     intron_pos      228:1 (6/10)
     intron_pos      300:1 (7/10)
     intron_pos      401:1 (8/10)
     intron_pos      530:2 (9/10)
     intron_pos      602:1 (10/10)
BEGIN
        1 MNIVTFLLFG IFPLSAAISP INLENCNPGS YFVENYIKYQ CYQSGSVKGY NIAGCQPSND
       61 LTGVTLQQWE THNEKWFKYH CVIDGTNAQY SVKTCLDPVG EVLPVGKTRS FPDGETFTCF
      121 IERNKVKLNH QTTAGCQVGD QVYGDRATWI DRREDVIIIG SENKVVGKGS TMQCKKSENG
      181 SFVVEVAACL TAENTYIRPE DFGTVDDAVV KCAMVEGKCV LRKAEVTELG CRHNGKVYRH
      241 NEEWNSEDGA TVYACQFGKV EKEGCLVGNY LIPLYAIRYV DGNAFYCFQG TQVRSFGDLK
      301 GCTTTSGDII QFENRARNGD RLESCGFSIN RDGTVEFKWT QVGCIYSKEM ITVNAIQQFG
      361 DQYVHCALNG TAGYIVKMMT REEVEKWLTA TKQQWSNIVS GKDGKGNSVK REVPTTPLPT
      421 TTTTTTTTPK PTTTTTTTTT PAPTTTQKPT TTTTTPAPTT TSTTSIPTTI ATTTAAPLKK
      481 CTDFVEDCDK LRIYCHTEAE NAKFLKEAVK KFSTNPKNRS RMLEFIDHVF LEEQEPAHQK
      541 EQNKEQDCPI NSKSCEKCSH SKCEKCAKHP HHHCKCEDQK EFNRKIVRAL CPKTCDICNE
      601 THPSVSTILS TRISGACLKP QCEI
//