LOCUS       CCD69762.1               846 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Homeodomain-interacting protein
            kinase 1 protein.
ACCESSION   BX284606-914
PROTEIN_ID  CCD69762.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="hpk-1"
                     /locus_tag="CELE_F20B6.8"
                     /standard_name="F20B6.8b"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00001994"
     intron_pos      53:0 (1/7)
     intron_pos      74:0 (2/7)
     intron_pos      133:0 (3/7)
     intron_pos      316:2 (4/7)
     intron_pos      359:2 (5/7)
     intron_pos      606:1 (6/7)
     intron_pos      767:2 (7/7)
BEGIN
        1 MPKRKNSGQS TDLNSRSPKT IDEALRILAP PQALLVQSQL NLTAPANPFS IQKAPGTSSD
       61 NEQRAPKRRA DEEAVNAVPK NLLTTSSTFA RAVIPAAPAI SSANNKMAPQ SVTATAKTTT
      121 NRGKVSGEGE YQLIKNEVLC SPYGNQYEVL EFLGKGTFGQ VVKAWKKGTS EIVAIKILKK
      181 HPSYARQGQI EVSILSRLSN ENSEEFNFVR AFECFNHKSH TCLVFEMLEQ NLYDFLKQNK
      241 FMPLPLNAIR PILFQVLTAL LKLKSLGLIH ADLKPENIML VDPQQQPYRV KVIDFGSASH
      301 RSKAVTNTYL QSRYYRAPEI ILGLPFNESI DMWSLGCVIA ELFLGWPLYP GSSEYDQIRF
      361 IIQTQGLPPT SMLESASKLH RFFKEVKSES PNHTNVGGSY YRLKTVEEYE ASSSTAKSKE
      421 TRKYIFNVID DISRVCYGFE SDPVEHLCDR IDRQEFVDVL KKMLVLNPDF RITPAEGLES
      481 KFVTMTHING YNFANYVHEA HKRMEICRKP GPAMATPYRA ANVATPITPV EKPPAPKLQQ
      541 PMIAVLPQLN QIAATNIPPV PTQPDLTNLM HHYSQMAAAT GSAATAAQFF YQPLPPAPLF
      601 QYAQLHHPFA ARPPHFLSLA TPSHMVPQFV PVPIMDPSML QGQWPPGAAQ QFAVLANDIM
      661 RVPAPQGINQ MFASTPQTFS LPQFLSSSIP SATTAFNGNA PNIPFPEENS SWALGTAAQQ
      721 QQQQAQRAQS MINGNVKVKP LAAQPKKNSP APSVITLSSD EDSNGAGSSN SGSTTRTGAV
      781 NPVRNDTLPM GNTIKTEDIL VPPTTFDGQL PNLQYFPGSH LFDPKTVAGL LPNPFLDTSH
      841 IPRAFN
//