LOCUS CCD69756.2 1415 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Multidrug resistance-associated
protein lethal(2)03659 protein.
ACCESSION BX284606-906
PROTEIN_ID CCD69756.2
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="mrp-6"
/locus_tag="CELE_F20B6.3"
/standard_name="F20B6.3"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00003412"
/db_xref="EnsemblGenomes-Tr:F20B6.3"
/db_xref="GOA:Q19625"
/db_xref="InterPro:IPR003439"
/db_xref="InterPro:IPR003593"
/db_xref="InterPro:IPR011527"
/db_xref="InterPro:IPR017871"
/db_xref="InterPro:IPR027417"
/db_xref="InterPro:IPR030244"
/db_xref="InterPro:IPR036640"
/db_xref="UniProtKB/TrEMBL:Q19625"
/db_xref="WormBase:WBGene00003412"
intron_pos 26:0 (1/17)
intron_pos 97:2 (2/17)
intron_pos 165:1 (3/17)
intron_pos 290:2 (4/17)
intron_pos 332:2 (5/17)
intron_pos 383:0 (6/17)
intron_pos 667:2 (7/17)
intron_pos 836:2 (8/17)
intron_pos 927:1 (9/17)
intron_pos 954:0 (10/17)
intron_pos 1004:1 (11/17)
intron_pos 1040:0 (12/17)
intron_pos 1080:1 (13/17)
intron_pos 1115:0 (14/17)
intron_pos 1183:0 (15/17)
intron_pos 1266:0 (16/17)
intron_pos 1358:0 (17/17)
BEGIN
1 MSISSPRKSN KENETLLIEQ KEDLKKTPDE TKPDVNLESV EGYHPSSEDS AGLISSILFS
61 FVGFYWWRTR NAQTDTDLLE KPSKGISAKY AAQKLESKWI SSGPKRTHFL VGVWHCTKVS
121 VMAHAISLCL EELTRVAQPL LLRELMSYYD IEEGQEFPYW PAMQVALIIS LLSFVTVCIH
181 HPYFHGLLKV GNHARVATGV LLYRKSLRIS LTSLFETNSG QIIQLLNTDA AKLEQAFLFA
241 HYVWLCPLLM FFYAYILWSM FGFCCLLGFL VMMAIVSFQV HYSYQLGVNR RNIGDKMDSR
301 LKVMSEIING IKVIKMHGWE NAFAEKIRIL REDEIKAVGT SAFYSSMVMG IYFISAKIGL
361 FVYIFACDYF DEILTTRGVF ASSALFNSVR LPFALFLPLG LLFGRELFST SRRIDLFFCL
421 EEYSRITLEL DSTDTEDGSK NEKEGLTLKK IGEKPSWTLK CDKAEKTSVF LNKVTAVWYD
481 KDEHDQKKKK KNFKALSDND ATVIAGEKKD EPLHVVYAVQ DLSFEFVAGT CYGIIGSVGS
541 GKSSLLLTIL SESRMTRGNL SVNGSFAYCA QEPWIFTGSI QDNIVFGSEF NKERYENALE
601 LCLLTPDLRQ FANGDMTIVG DNGSTLSGGQ RARVALARAV YADADIYLLD DPLSAVDAHV
661 GKKLYENLIR GFLSDKLVIL VTHQIHFLSE LDSVILMKNN KMVGNGSLDE LKSTFTDDFI
721 KLQAVETEVQ SDELFVDGPP SSPPPSPVNI ESMEKINKES IFQRANSVLS GSKMSETEYV
781 KEIVYESRKS GTISWSVYWE YTRGVINPLK YGIWLVVCVL ITQLMNNFVD WWLNKWLVDL
841 DMNNADNSTS KEEFNRNVDV LGYTFNVTFQ TYELTFIIST VIMSILGVVR SVWFRNAQLM
901 ASRILHNSMF DCVLKTESEF FDKNSEGMIL NRFSKDIGLT DDLLAFTYFE FVFGTLTFVG
961 IVGLVSMVRP IVILACAFIT AGFYFCRKMY VHRSRELKRI EAAARSPLNT TITSTVHGLS
1021 TIRAYRKENE MIEKFCALHD VYMAAYNMGL LSARWFGICI DFLVSVFVSI VAIVVVLQYE
1081 TLTVGEVGLC LVCAVQLSGF FSWIMRQSAE LENGMVSVER VLEYTKLKSE EEARRPHDAY
1141 LDKQLLNSWP TKGEIEFENV SVNYGETKVL KNLSFVVLGG QKIGVVGRTG AGKSTLIKII
1201 FGLKEYCSGR VTIDGVDLDH ISLNFRRGGM SIIPQEPVIF SGTVRENLDP FDEYDDATIW
1261 FALEQCELKR SITKEKGLNV ELGQRGVSLS VGQRQLFCLA RAMIHRSKIL VIDEATANVD
1321 GVTDACIQKT IRDFFKNATI ITVAHRLHTI MNSDNVMVFE KGELVEFDKP ITLLDDQSSL
1381 FSRMAAQSGA ENFDSLRAAA LAHAIDDQSS YTDNS
//