LOCUS       CCD69445.2               727 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Zinc metalloproteinase nas-38 protein.
ACCESSION   BX284606-113
PROTEIN_ID  CCD69445.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="nas-38"
                     /locus_tag="CELE_F57C12.1"
                     /standard_name="F57C12.1"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00003554"
                     /db_xref="EnsemblGenomes-Tr:F57C12.1"
                     /db_xref="WormBase:WBGene00003554"
     intron_pos      49:2 (1/16)
     intron_pos      76:0 (2/16)
     intron_pos      115:0 (3/16)
     intron_pos      147:2 (4/16)
     intron_pos      191:0 (5/16)
     intron_pos      225:0 (6/16)
     intron_pos      261:1 (7/16)
     intron_pos      305:0 (8/16)
     intron_pos      361:0 (9/16)
     intron_pos      392:1 (10/16)
     intron_pos      476:0 (11/16)
     intron_pos      554:0 (12/16)
     intron_pos      585:2 (13/16)
     intron_pos      610:1 (14/16)
     intron_pos      645:2 (15/16)
     intron_pos      683:2 (16/16)
BEGIN
        1 MPSPSYNRHI IIASCFCCLL IFSSAARVPK ASKKHLARVK QLLNDEAERH NTLIQSDSVT
       61 VFDDIQRNPN TGVHHDELAV NNADEYFQGD VDLSEQQVKI IEDQFTQGKR EKRKIGRNPL
      121 YKKWDTRGPI SFDYAESIPF QTRQKIRSAM LLWQQHTCLR FEEGGPNVDR LEFFDGGGCS
      181 SFVGRVGGTQ GISISTPGCD VVGIISHEIG HALGIFHEQA RPDQERHIAI NYNNIPLSRW
      241 NNFQAVGENH AETYNLPYDT GSVMHYGPYG FASDPYTPTI RTLERVQQST IGQRAGPSFL
      301 DYQAINMAYG CTESCADLPC LRNGYTHPNN CSMCACPEGL SGRYCEQVYP SNAQCGGVIF
      361 ATKEVKYITS PNYPDKFPID TECNWIIAAP IEGRVFMEFE GDFDFLCEDT CDKAYVEVKY
      421 HSDKRLTGAR YCCSLLPKNR FISFKNEMII IMRGYRSSGA GFKAKFWSNL GEPEGVSTPL
      481 PPTTAPLPEI SETTQKPEPT TVQSTTTYTT AIPRRTAKKQ FFTRKPITIP LTPLTSSSTT
      541 TESTTVSSTT QSTTWLPTEP SFATGETEIT TASPTITLFP SLSTILPPIN SLAGVLPSTQ
      601 APDIINSVLE CGCGAWSEWQ GECSQQCGGC GHRLRKRECK KEACRKEEKR PCNFSACPDG
      661 TNFLINNAEF HILWRGCCVG LFRSGDQCSA LETESNPFFK IINSLLNIQD AKNNDTLIAK
      721 RMMRGEH
//