LOCUS       CCD69234.1               767 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Discoidin domain-containing receptor
            tyrosine kinase B protein.
ACCESSION   BX284606-711
PROTEIN_ID  CCD69234.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="ddr-2"
                     /locus_tag="CELE_F11D5.3"
                     /standard_name="F11D5.3b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Tr:F11D5.3a"
                     /db_xref="GOA:Q95ZV7"
                     /db_xref="InterPro:IPR000421"
                     /db_xref="InterPro:IPR000719"
                     /db_xref="InterPro:IPR001245"
                     /db_xref="InterPro:IPR008266"
                     /db_xref="InterPro:IPR008979"
                     /db_xref="InterPro:IPR011009"
                     /db_xref="InterPro:IPR020635"
                     /db_xref="UniProtKB/Swiss-Prot:Q95ZV7"
                     /db_xref="WormBase:WBGene00017381"
     intron_pos      28:2 (1/12)
     intron_pos      61:1 (2/12)
     intron_pos      106:0 (3/12)
     intron_pos      155:1 (4/12)
     intron_pos      252:0 (5/12)
     intron_pos      356:1 (6/12)
     intron_pos      445:2 (7/12)
     intron_pos      469:2 (8/12)
     intron_pos      545:1 (9/12)
     intron_pos      588:2 (10/12)
     intron_pos      614:2 (11/12)
     intron_pos      717:0 (12/12)
BEGIN
        1 MSNRKIRDEQ ISASSSFDLQ STGPQHARAH QESGSGAWCP KNQINSLSKE WLQISFSVDT
       61 VITSVETQGR FDDGRGMEYA TAFKIQYWRP SLNAWASYKD DFELETIPAN NDTEHAIRRH
      121 LDRAIIARRI RIVPVSNSTR TVCMRVEVFG CPFDDSLVFY NVDQGDLQSG ISYHDFSYDG
      181 NLANSPHLTG GIGKLYDGEV GKNNVFVNHH KWVGWRRKRN GNVKLAFEFS ELRNISGILI
      241 HTSNEFKKSA KAFSSATVLF SINGKDFSDT IVHFNNPEDT ESEVPRWIRI PVNNRIAKVA
      301 KIRLNFGTDS DWLFISEVNF ESNHTNIELL NDDVVIPDSV SYFSVTEHDD GTSMFAFIIF
      361 FFMFLIVAVI ILTVLYRKRE YRVKASSPSP NAKREILLTI DGNTIKHHVS PSTYQMARDN
      421 LQNALIEKMP MSPIISDYAE PDISVCSDVT ANTPLLYGID GPYDTQKRSN PLSSMVKYSD
      481 YGEVYCTTLP EIARDKLICV SRIGQGEFGE VDLCQLENRK VAVKKLHGIS QADEFSFHRE
      541 IRVLGSLKHP NVVEVVGVCT IQKPILCIME YMENGDLKSY ILKNPTIQTS QCISICTQLA
      601 AGLAYLESCN FVHRDIAARN CLVDGEGNVK IADFGMARSL YSQEYYKVEG KFVLPIRWMA
      661 WEALLLGKFS TASDVWGFGV TMWEIFSLCS EKPYSDMTDD DVVENLQSMS STGSLKQVLS
      721 RPRMCPSKLY NEQILPCWNY ESSRRPSFEN VHLHLQSLVH TSPHIHF
//