LOCUS CCD68815.1 243 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Zwei Ig domain protein zig-6 protein. ACCESSION BX284606-1154 PROTEIN_ID CCD68815.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="zig-6" /locus_tag="CELE_T03G11.8" /standard_name="T03G11.8" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00006983" /db_xref="EnsemblGenomes-Tr:T03G11.8" /db_xref="GOA:Q22125" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR003598" /db_xref="InterPro:IPR003599" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR013151" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/Swiss-Prot:Q22125" /db_xref="WormBase:WBGene00006983" intron_pos 21:1 (1/5) intron_pos 71:2 (2/5) intron_pos 121:1 (3/5) intron_pos 168:1 (4/5) intron_pos 198:0 (5/5) BEGIN 1 MTKLCLLLLP LVFLVSYSFA EEEITISISP NANPVQKPIG HQISLVCSIK KTDSNGEKPG 61 MIWKKHGGLD RTGNVEVKKL DDYTLGLIIR NSSVEDSGVY YCQAQVGSKV YMNKMDVIVF 121 EDIVFRDKQL HFGQVLATAS VNISCEVSAK KDSVITYWTR HGKQILEGGK HKFYSRGSIL 181 EIQNYQPEQD AGQYTCEVFH VSSGSSNTKT VTLGTTGEKN YVACQQMCNS FCTDVHNKVF 241 TNN //