LOCUS       CCD68799.1               865 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans CUB_2 domain-containing protein protein.
ACCESSION   BX284606-2043
PROTEIN_ID  CCD68799.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="M02D8.5"
                     /locus_tag="CELE_M02D8.5"
                     /standard_name="M02D8.5"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00019731"
                     /db_xref="EnsemblGenomes-Tr:M02D8.5"
                     /db_xref="InterPro:IPR035914"
                     /db_xref="UniProtKB/TrEMBL:Q21464"
                     /db_xref="WormBase:WBGene00019731"
     intron_pos      43:2 (1/17)
     intron_pos      82:2 (2/17)
     intron_pos      129:1 (3/17)
     intron_pos      211:2 (4/17)
     intron_pos      255:1 (5/17)
     intron_pos      310:1 (6/17)
     intron_pos      332:0 (7/17)
     intron_pos      373:1 (8/17)
     intron_pos      499:1 (9/17)
     intron_pos      540:0 (10/17)
     intron_pos      570:2 (11/17)
     intron_pos      649:0 (12/17)
     intron_pos      689:2 (13/17)
     intron_pos      724:1 (14/17)
     intron_pos      761:0 (15/17)
     intron_pos      798:2 (16/17)
     intron_pos      837:1 (17/17)
BEGIN
        1 MYTKLNLIPL FFIIFFRTSV AFQDGILFST PNFPQPYTGQ LSERRSVSVN ETQGVAVVFE
       61 QFLASAHDCV IACPTNNDGC SSLCGDAMDH GLVPKILRVP GSADIAMVSI EQNDGFPHSG
      121 ISGKIISYDL NTISFFQCND QVDLSTGETY YLVSQNYPLS PTTEFSSCSI NFSTSGNRQG
      181 IRFAVYDFYT NQNQKDSFFI TGSNGQNVKI TGFATEDEPV VYYFQNGANA IFSITHQDHS
      241 FIQKRFYILV KSYEIAAEKQ CDNMGNFNLA LGQSINFGTK QFGINSYDNN LNCGYNFSRV
      301 ATANSLFALG IQYESEKCCD TMVIDGLTEY EQIYQGFQYS NLFFTKSQQV SFLFQSDGII
      361 GGTGLNASLE HIDCTCSPDM MLGKNSVLTS PGYTNSISYC PGLECSSNIE FQDDLYDLQL
      421 EFTDISLRGY SLNNETDSLT VYDSYQHIVV QMMPFYAAFT SFWATVSPVN VQFISKSLTA
      481 FPLDQIGRGF SVNLNLLKKQ FVTNNIVFND AFFFEDISNL LLKSGNTYEF VITGRAGHQI
      541 SIYFFTKTTN QVFIDIFDGD SMDAKRIDNK ALYSNVLENG PSLSLTTTSE KAILHVRGNP
      601 TFLQPGTDFQ AMITDLKLPT ECGPLVHSMR EQKTSSGDIT LRGNNCYKVL HFSDSSYNQG
      661 AFMNIAFSKP ISSKIFYGLT TSSDDCIAHN SSEPIAQDLF KNYLVLQYST TDISSVSYSW
      721 AISSGIIART MQPGETVVLV SDDYRKYNAS PLDQQFSVQL EGESNVQTGL MCEFLADSGS
      781 GAGTLSWSSY DDIKQKTSYS NAKKSLKYAS CGNKLLVDYT SPDGGPDNGL YLKITRADLR
      841 CSRSPMRLSI SVIVLLTVSF ISLIF
//