LOCUS       CCD68586.1               854 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Protein O-GlcNAcase protein.
ACCESSION   BX284606-2167
PROTEIN_ID  CCD68586.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="oga-1"
                     /locus_tag="CELE_T20B5.3"
                     /standard_name="T20B5.3a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00020596"
                     /db_xref="GOA:Q1WBU8"
                     /db_xref="InterPro:IPR011496"
                     /db_xref="InterPro:IPR017853"
                     /db_xref="UniProtKB/TrEMBL:Q1WBU8"
                     /db_xref="WormBase:WBGene00020596"
     intron_pos      6:2 (1/12)
     intron_pos      25:1 (2/12)
     intron_pos      75:1 (3/12)
     intron_pos      154:0 (4/12)
     intron_pos      208:1 (5/12)
     intron_pos      298:1 (6/12)
     intron_pos      347:2 (7/12)
     intron_pos      422:0 (8/12)
     intron_pos      506:2 (9/12)
     intron_pos      605:2 (10/12)
     intron_pos      694:0 (11/12)
     intron_pos      801:1 (12/12)
BEGIN
        1 MEQTESFDRR KAVQNSKYIC GVVEGFYGRP WTPEQRKHLF KRQNQLGLTT YLYAPKDDIK
       61 HRSLWRELYN NEEMTYLRNL VESAKDNNVN FVYAISPGKD ILYSSDEEMD TLKNKLDQVR
      121 SVGCDSFAVL FDDIEVQMQD EDQKQFTSFA HAQVHIANTI FKYLNTKTFM FCPTEYCESR
      181 AVPTLESSQY LNTIGEQLAG DIHIMWTGPR VISRYLTVEH LARVGSVMRR KPLIWDNLHA
      241 NDYDLKKIFM GPMMHRSVKI KEFTSGLLSN PNGRYEANFV PFHTLSDWNA ADRDLRENES
      301 GISSRNGVIL NIDCNTETIY VPEVSLVNAV STWIDEFITP SVTNAPQPPQ LTADVAGYVP
      361 DRRECVWLLD LPETHGVIRP EPVMPAEIAT ENIIQSAVAP EEPVPSELNS LAAEYSQPME
      421 TEDPVESQED ESMVSVDEDV SAPVVLPGLA TTAEEIRNQR LSLLCATCEM YYLPFENGPR
      481 VQSMFKDFRW LMQNASVMKK SFKEIETLDP LQSEWLVKYD GVNEFLTSAI DSFFFITQAP
      541 NKAILSEIVP YAFDAHSCCV LLIAVARWMM QGNALDNPEN NLFEDFGSTE ERWINQNGFR
      601 SETMRVLNVV DDIEVLLSNK IFLPLCMFCF DIRPFTIADK EYISGMVTVM LTTNQELLHR
      661 RATNFADRNI IPFLCSGAEH NFLCEKVDET GHKPVCYASA HFDGTLFSNF LITYKEKLKE
      721 KYRGLIEDSK IGSTKLTDEY IEFIQNSQTP MDIEEWYPKI PDQIFENYPA WVETYFGMDA
      781 SDAHPMRKVI QVVAVTLAMN GSRGYFLTVA IDDIERQKYF LELGLTDLGL SICQRFRIFG
      841 QTLRSTSRQS STSE
//