LOCUS CCD67560.1 1105 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Flocculation protein FLO11-like protein. ACCESSION BX284606-1817 PROTEIN_ID CCD67560.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="ZK154.5" /locus_tag="CELE_ZK154.5" /standard_name="ZK154.5" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00022667" /db_xref="EnsemblGenomes-Tr:ZK154.5" /db_xref="UniProtKB/TrEMBL:Q94314" /db_xref="WormBase:WBGene00022667" intron_pos 49:0 (1/6) intron_pos 127:0 (2/6) intron_pos 163:1 (3/6) intron_pos 629:0 (4/6) intron_pos 834:0 (5/6) intron_pos 915:2 (6/6) BEGIN 1 MNSTEGDISA TRKSSRTRLK RDFGTDFIDP TTVRISDKTN RTSDVKRKSQ TQSPPLNLDV 61 EEIKKELGEP IQVATDNVRR SDRQVKPSAK MVLVAECAKE IKFDVRDEDQ AYNFDDEPEE 121 GTSSSNSYVP TNVKVVKRKT PTMYAYSGST IDHEKNKPKK AIIQPPPLLE IYSPVGLTAE 181 EEQRLNDEAL AKVAVIRAAN VQKILEKRSL GKISTGGQAA AQDEEIFRYV TSNGNSELLN 241 KMPNRGSFAK GIPLNNKPAT SSSSNPKFVQ LMNRTIAVPP STSSRPPIPI FPVVTSAPRP 301 NQRPLPHMAP KLPVKVFIPS LARKINSSAV PLRDPKIELK DPKAELKDSN TVLKGITIKP 361 RFVIETPRPP FKKPKQEEQE HTNGEKKPEI LDEPIIQDEP RTMRPHEHCA IFNNLSTPKP 421 RHGENTTSIR TVTIMPKSMH LNKNGESAGP SLFATNKRPP SPPPVPQPPP IKRTENRTVV 481 YKGADGKMLV KNKVVVVNQH QAQEKPANST GFPRPIIPIP WPIRTRPLSD FEKYQRGKNK 541 SYTTLPDNVA SAKVVRSVNK PVDSQYVLAS DKNINLHPNQ PQLVLPLPQP IEEQLQTEVK 601 EEPKDEGVKE EPLDDYEHVD NDQEQEKTAS STSPVITSIV VPRPSKEYRK RRMPEVHYER 661 KSASPRQIFL GAEEPMKDST IYQLKRFTVG TISLTEQKTV ERIKQEIPSS ECSTASLDGD 721 GREKSFETGN DEVIDAEQIR QKEALAQKIT INEYKILDYM KSEDFKKCLP LEKEVTEFGK 781 VFMAPNVLAN VPEFSDSLYW SKPDLYMDLT RIHRIKYYEA NKTMNGYPIK STKALGPPQF 841 EKTKPPVRMS DAPVSVKDVV NKLIRKKPRL VEVVWNGITT QVPEEIVCHL CYDLMRLCMR 901 RSNYRGEMRE YPAYRCLRKG CQTFRSIKKQ IDLNVKQGKL YSLGPGEAST SDLKTTSEEI 961 VYMRPITAHT RPSARDLFEK NKSEPSESRY KVKTREEYMK ENDEEEELAG ETVSFEYFTE 1021 NHAYQDPLGR YLEGSRSPTP DWEDDNESSS SNVVDYRSLA KYNSKHLPSS LLAAHGIQIE 1081 SQLVKEVKIE QEMLMEEKKP ESLLL //