LOCUS CCD67511.1 817 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans VWFA domain-containing protein protein. ACCESSION BX284606-1341 PROTEIN_ID CCD67511.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="R07E4.5" /locus_tag="CELE_R07E4.5" /standard_name="R07E4.5" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00019938" /db_xref="EnsemblGenomes-Tr:R07E4.5" /db_xref="UniProtKB/TrEMBL:Q21816" /db_xref="WormBase:WBGene00019938" intron_pos 55:0 (1/5) intron_pos 117:0 (2/5) intron_pos 234:1 (3/5) intron_pos 620:0 (4/5) intron_pos 662:1 (5/5) BEGIN 1 MPFPNQIHFL VDASIKMHAI IDCDATPMEN AYIFLREICK KGDHQPTYID RVHIHIGDNY 61 IELEEGKALK MFEDSKSMIF EPSDQNDFLS LWKTALDADE DENALFFIVS TIVNEKILKM 121 FHKYHKKMTF LDFSGIKLNI SERLKSDVHL VEHGTSKKLA ATIHKKITEN YVTTVNFGTS 181 FGVELAPCTV RKNVPYELTK IDIVGTSTYQ PLETISVLTR SFLLPIDKCY DKKGSKVNNA 241 VAYCVLKEII GDKPVALLEK EDENDRSSDT SLEKSNEDIK KEIDDMKSET TAPVVPVKPR 301 APKKKFPNLV PNNENGYEGD GESGPITAEN VKNEKTNLTK GGRKRRLQTL EPSNAKKGKD 361 AKNGDLLSEV KNDKEAETKE NEDGKASADG TPDPLFLVAC ATERYTGLRR PVILRLREFD 421 KDDKTYYDEE TLKAKLEEHA VKKLEEEKDK LQSAAAPEDD SPASPPMDCP ASPDMVPVIP 481 QTVKIIPTVP TIPLETQDVD MREPSAPKDV DYRSQDVDLR VAVPVGDVDL RAQDKVQDSL 541 PVEVKKESCI VDDAVVPEEP PMEDLTTNQD QPVKLIPLEG QTELKAAEIK QEMSEETAAD 601 DNQSQENVFD YGKYIQIIVL DMTWEKFEKQ IAIVNDDDIF EELTEREKTV VGPEPNHDYT 661 KLTGWYSPEA MQFYVNKMVR ALRKLQDRSA LFEKEYQNMT RMVIYGQSPE MARQFAILIR 721 EESYGLERQA VPVADGAAQY FEQLSEQMLY QPRPRKAVSS RRHHYTQPHP HHQQMPHHQP 781 HLHHAHHPVH PHRGPRASHS QHLQHGQYAH HTQRPRH //