LOCUS CCD67243.2 509 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Major facilitator superfamily ( MFS) profile domain-containing protein protein. ACCESSION BX284606-205 PROTEIN_ID CCD67243.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="F53H8.3" /locus_tag="CELE_F53H8.3" /standard_name="F53H8.3" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00018779" /db_xref="EnsemblGenomes-Tr:F53H8.3" /db_xref="GOA:Q20734" /db_xref="InterPro:IPR003663" /db_xref="InterPro:IPR005828" /db_xref="InterPro:IPR005829" /db_xref="InterPro:IPR020846" /db_xref="InterPro:IPR036259" /db_xref="UniProtKB/TrEMBL:Q20734" /db_xref="WormBase:WBGene00018779" intron_pos 5:2 (1/11) intron_pos 45:2 (2/11) intron_pos 78:2 (3/11) intron_pos 111:2 (4/11) intron_pos 156:0 (5/11) intron_pos 247:0 (6/11) intron_pos 297:2 (7/11) intron_pos 357:0 (8/11) intron_pos 394:0 (9/11) intron_pos 423:0 (10/11) intron_pos 450:1 (11/11) BEGIN 1 MVTSRYLITV TTVVLGGSAQ FYSYGVVNPA QVVITDWINQ TYIDRYKAPL SLTVSNVIWS 61 FVVSSIAIGA ILGASFTRII GEKYGRRNGM FFNGILNVFA ALFELVAKRF SSPELLIFGR 121 FVYGINMGLS SGLVPMYLME ITPYKYRGPA GTLHQIAVAF SDWFSLLIGL PEVLGDQNNW 181 PLAFALPGLP ALALVCILPF CPESPKYTLG TKHDRDKALK DVELLIGKEQ APHMFESIVR 241 EVALDEGDGT FRELFTRPDL RIPLAVSIIV MIAQQFTGCT AVFAFSTDMF LNAGLTPVIA 301 RFSTLAIGIV YFLFACTSPF LIHKVGRRWL SLFQLASCMV ALMLLSLFTF LQNYENIEWA 361 RYGTIFSLVF YMCVYGVGSP IPWIIASELF TQQFRATAVT VSVFVAWTFA FIVSTSYLPF 421 QQLVGITFSY FPFIIGLAVF GIFIYVLLPE TRDRPMVEIV TEVHHRTASL SAGRPWDASR 481 PPSRQEVQRL LDTMDPRSYS SYDNSTLED //