LOCUS       CCD66769.1               975 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Protein vav-1 protein.
ACCESSION   BX284606-2140
PROTEIN_ID  CCD66769.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="vav-1"
                     /locus_tag="CELE_C35B8.2"
                     /standard_name="C35B8.2a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00006887"
                     /db_xref="WormBase:WBGene00006887"
     intron_pos      37:2 (1/16)
     intron_pos      68:0 (2/16)
     intron_pos      126:2 (3/16)
     intron_pos      173:2 (4/16)
     intron_pos      201:0 (5/16)
     intron_pos      304:2 (6/16)
     intron_pos      373:0 (7/16)
     intron_pos      565:2 (8/16)
     intron_pos      615:1 (9/16)
     intron_pos      655:1 (10/16)
     intron_pos      718:0 (11/16)
     intron_pos      754:2 (12/16)
     intron_pos      837:2 (13/16)
     intron_pos      868:0 (14/16)
     intron_pos      898:0 (15/16)
     intron_pos      946:0 (16/16)
BEGIN
        1 MNGGCDLWIG CARWLRDMKV LTTDKNGTML EFASVLRDGI LLCRLANTLV PNGIDQKKIM
       61 RTNQPSPFLC CNNINYFAMF CKTYFNLEDA DLFTAEDLYY MNGFQKVLKT LSFLSHTKES
      121 LSRGVDPFPD TDNNQEGTSN GSEFEDDVEI YQSLHDNIEN VDPNRTIYGP ITSADPEEQQ
      181 SEQLYDRIVT NRKPSMNEND LQNTPTLKRN RCIRELYDTE KNYVAQALVT IIKTFYEPLK
      241 GIIPTSDYNI IFGNIEEINV LHTALLADLE YPVKVALGLS DATPPRPISL NECVPQTIGE
      301 VFIKYRDQFL AYGKYCSNLP DSRKLSNELL KTNEFISRNI NELTAQGNCK FGMNDLLCVP
      361 FQRLTKYPLL LKELQKKTDL ASPDRKSLEE AVEVMEDVCN YINEESRDTN AIKVIDEIEQ
      421 SITDLSMPLN VKLHDYGRVN LDGEVKMAES TLTQAGKPKQ RYIFLFDKVI VVCKAANKVM
      481 AAKTTGASAR TNTFTYKNAY VMSELTIDKN ASLDVKSGGT ITRRTQYVII MTRDRNENNE
      541 ITQLTFYFKN EATRNNWMTA LLLSKSNVSP TDYLRDTNHK VAFHSFRVDV KNPATCDVCD
      601 KLMKGLQYQG YKCESCNMSM HKECLGLKKC EAVRKSTHET RSSQSFNCNR PRFHIHEGDI
      661 VVANSNSTPS DLSYLQFAKG DRIEVIKMQG HNRFTGCLIN NRNRTGLVHL DHVSQSRTTS
      721 MIGLSPIDSP AGSIAPRVVR NESTVLPNKL LSDGSSRSLS GPHGSRSSRN SSSSTINGSM
      781 DSVPRQQDYV NTEISEFLWY MGEMERAKAE STLKGTPNGT FLVRYSKNRK QTAISLSYKN
      841 DVKHMIIEQN SDGKVYLDED YIFNSTVELV QYYRSNNLIE IFAALDTCLK NPYSQCKVFK
      901 AVHDYDAPSP NNEGKFLSFK TGDIVVLLDT VGEDRGWWKG QVNNKSGFFP LSYVKPYDPA
      961 TEGSSSPVTP TSSSS
//