LOCUS       CCD66172.3               742 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans SID1 transmembrane family member 1 protein.
ACCESSION   BX284606-3956
PROTEIN_ID  CCD66172.3
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="C30E1.4"
                     /locus_tag="CELE_C30E1.4"
                     /standard_name="C30E1.4"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00016253"
                     /db_xref="EnsemblGenomes-Tr:C30E1.4"
                     /db_xref="GOA:O17334"
                     /db_xref="InterPro:IPR025958"
                     /db_xref="UniProtKB/TrEMBL:O17334"
                     /db_xref="WormBase:WBGene00016253"
     intron_pos      57:0 (1/15)
     intron_pos      90:0 (2/15)
     intron_pos      120:0 (3/15)
     intron_pos      149:2 (4/15)
     intron_pos      166:2 (5/15)
     intron_pos      197:0 (6/15)
     intron_pos      227:0 (7/15)
     intron_pos      252:1 (8/15)
     intron_pos      275:1 (9/15)
     intron_pos      298:1 (10/15)
     intron_pos      358:2 (11/15)
     intron_pos      480:1 (12/15)
     intron_pos      526:0 (13/15)
     intron_pos      560:0 (14/15)
     intron_pos      608:2 (15/15)
BEGIN
        1 MMRLFFLNII TIFHYCKADD YHHFQNLTLG ESYTNLTTKG DLITSLFTVH LENNLTLSAF
       61 RVSIASDSAS LNNPFNVNFY HAKTIHNIVL PRVQTQNGKS FEYLFASDTL CDNNRSTIQL
      121 HQPIHLSVAS YSQSVFSLKV ESVENFLIGS NKFNSSASPS APRYYMYTFP DDVDKVNIRV
      181 TSETEICGKI VTRQVKCPLF EASGLVELSD AHFFQTFTKF AGFSIRKNYI GRQFHIAFIV
      241 NPDETLCGKP SNLIGIFGNL DRIKNATILI SPVDEHKFLS VVPLLVYMTS IAIVLTLTYV
      301 KFKFMDSHEN NELDVFAETN SEGIVVVDKV WLFEPPSMVV SHNEYQKQGL VKDSKYFNFL
      361 FFQVFGFVLP AGITLFVSRQ QNRNNLDVCY LNYLCSLDVF GFNAFNSMTS SSSIAVIGIL
      421 NLIIVFRKKI FRYQVPRFPT SHGVQKRQAP KVVFLLGLCA VGIWSIVTVN CPRSYTYHLN
      481 YFTRLWVWHS ITMWIYSKRH GIQKWQQLYI LAFSSASQFL ALAANIFELS GVPGFIIKIL
      541 FAMLSFSSTA FFCFKYYFQR PSGIQENQWI VSPLQTVECV LSEQNNVYRP LKSKLALMTC
      601 LMLSTFFCAT LPCISNSLLY VAILLVASGQ CQIYLYYYII QKIRFERKSF KKSYMFYTVT
      661 IFAIMAINEF SSGILLSRSF TSDVSLTPAK SREMNANCFL PGTDWKDILN YSSAFDLLMI
      721 MIFMDFIDSN LKSVPKKHIF VF
//