LOCUS       CCD65832.1               784 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans AMP deaminase protein.
ACCESSION   BX284602-1835
PROTEIN_ID  CCD65832.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="ampd-1"
                     /locus_tag="CELE_C34F11.3"
                     /standard_name="C34F11.3a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00016415"
                     /db_xref="EnsemblGenomes-Tr:C34F11.3a"
                     /db_xref="GOA:H2KZ18"
                     /db_xref="InterPro:IPR001365"
                     /db_xref="InterPro:IPR006329"
                     /db_xref="InterPro:IPR006650"
                     /db_xref="InterPro:IPR032466"
                     /db_xref="UniProtKB/TrEMBL:H2KZ18"
                     /db_xref="WormBase:WBGene00016415"
     intron_pos      31:0 (1/11)
     intron_pos      46:1 (2/11)
     intron_pos      64:0 (3/11)
     intron_pos      98:2 (4/11)
     intron_pos      139:2 (5/11)
     intron_pos      216:1 (6/11)
     intron_pos      253:0 (7/11)
     intron_pos      292:2 (8/11)
     intron_pos      499:2 (9/11)
     intron_pos      559:0 (10/11)
     intron_pos      732:0 (11/11)
BEGIN
        1 MPKDTNGVHF FNPAADNSDE ETTAASPSSD VARPNPLDSA REYGMKTVDS ELFDSGPFKK
       61 NFAFGNADHS TASPFEISTT PIEVNESRAH KTIEISNRAR LESQNDGCLS PSSLKSVLDE
      121 IQTEPRCKSP QHIDLHTFRD AVDVNYQRMA ITGEELSGVP LEDLKTASGH LIEALHLRSK
      181 YMERIGNQFP STTRNFLSGH YPANLPKHRV KNTETTVQTS FNPPDPPKDH WGKNDPLPKY
      241 EKIYHLRRNR GVTEICNDDG SIDQQFKNVN VTKEEFLNDT EKLTAMIVDG PLKSFCFRRL
      301 SYLENKFQLH VLLNELRELH EQKGVSHRDF YNIRKVDTHI HAASSMNQKH LLRFIKKKIK
      361 TEADTVVLNN NGTKVTMKEV FKKMGIDAYD LSVDMLDVHA DRNTFHRFDK FNTKYNPVGE
      421 STLREIFIKT DNYVGGKYFA DLLKEVLSDL EDSKYQHAEP RLSIYGRSKN EWDNLAKWAL
      481 THDVWSPNAR WLVQIPRLYD VYRAKNMVKN FDDMLDNLFT PLFEVTNDPS SHPELHLFLQ
      541 QISGIDSVDD ESKHEFVNFD RSTPCPPEYT DLENPPYNYY LFYMYRNICA LNAFRRARGL
      601 NTFALRPHCG EAGHVSHLLT GYLTSESIAH GILLRKVPVL QYLYYLTQIG IAMSPLSNNS
      661 LFISYQRNPL PEYLQKGLNV SLSTDDPLQF HYTKEALMEE FSIAAQVWKL SSCDMCELAR
      721 NSVMQSGFED KVKIHWLGPN YKEEGVLGND IHRTNVPDIR VSFRHEALVD ELYNLFRVQN
      781 TLKQ
//