LOCUS CCD65829.1 636 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans DiSHevelled related protein. ACCESSION BX284602-1845 PROTEIN_ID CCD65829.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 15279421) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="II" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="dsh-1" /locus_tag="CELE_C34F11.9" /standard_name="C34F11.9a" /note="Product from WormBase gene class dsh" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00001101" /db_xref="EnsemblGenomes-Tr:C34F11.9a" /db_xref="GOA:B7WN58" /db_xref="InterPro:IPR000591" /db_xref="InterPro:IPR001158" /db_xref="InterPro:IPR001478" /db_xref="InterPro:IPR003351" /db_xref="InterPro:IPR008339" /db_xref="InterPro:IPR015506" /db_xref="InterPro:IPR029071" /db_xref="InterPro:IPR036034" /db_xref="InterPro:IPR036388" /db_xref="InterPro:IPR036390" /db_xref="InterPro:IPR038207" /db_xref="UniProtKB/TrEMBL:B7WN58" /db_xref="WormBase:WBGene00001101" intron_pos 41:1 (1/11) intron_pos 74:0 (2/11) intron_pos 123:2 (3/11) intron_pos 196:1 (4/11) intron_pos 228:1 (5/11) intron_pos 253:2 (6/11) intron_pos 294:1 (7/11) intron_pos 374:2 (8/11) intron_pos 433:1 (9/11) intron_pos 512:1 (10/11) intron_pos 568:1 (11/11) BEGIN 1 MAESPPPVDS SLNAPNVGSP TTMMERLRLR DQTEENGKED DFDNKSVSSA QYSQTSEATT 61 AVKQQPFLHT MTKVYCHIDD ETDPYMLEVH VPPDLITLGD LKRVLMRTNF KYYRKALDPD 121 SGYEVKAEIR DDSQRLTPSP NNLFELFLLT IEGSTHSDGS SGKMRKYPSV PGPAPSNRNG 181 PPMNYQHAAY QFDNSMMSTD SESMISAAIP GYLKSAAYNR RFPQHYLGHR RHLEESTIGS 241 ESDARVFSDD DDRGSTTTDF TSVSRQHEKM AKKKKNKRNF RKPSRASSFS SITESSMSLD 301 VITVNLNMDT VNFLGISIVG QTSNCGDNGI YVANIMKGGA VALDGRIEAG DMILQVNETS 361 FENFTNDQAV DVLREAVSRR GPIKLTVAKS FENGQSCFTI PRNSREEPVR PIDTQAWIQH 421 TNAMRGMPSI VEESAPTPIP GEWPHGRPPS SSTVTSNGSN GQNTVVGGGA HIILDIHTDK 481 KKVVEIMAMP GSGLDIKNRT WLKIPIPMSF LGSDLVEWLL DHVEGLRERK TARNFAADLL 541 KLKYIAHVVN KVTFTEQCYY VLGDECSDYA RFRNEDGGPK YQWTIGMNGM SAGNGSSVML 601 PPPHLPGGMA GPPGAFKGMA PSMVSDGESR MYVMHI //