LOCUS CCD65625.1 692 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Potassium voltage-gated channel subfamily KQT member 5 protein. ACCESSION BX284606-1535 PROTEIN_ID CCD65625.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="kqt-1" /locus_tag="CELE_C25B8.1" /standard_name="C25B8.1a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00002233" /db_xref="EnsemblGenomes-Tr:C25B8.1a" /db_xref="GOA:G5EDN5" /db_xref="InterPro:IPR003937" /db_xref="InterPro:IPR005821" /db_xref="InterPro:IPR013821" /db_xref="InterPro:IPR028325" /db_xref="UniProtKB/TrEMBL:G5EDN5" /db_xref="WormBase:WBGene00002233" intron_pos 9:0 (1/15) intron_pos 41:1 (2/15) intron_pos 59:0 (3/15) intron_pos 108:2 (4/15) intron_pos 139:0 (5/15) intron_pos 181:1 (6/15) intron_pos 240:0 (7/15) intron_pos 282:0 (8/15) intron_pos 319:0 (9/15) intron_pos 379:2 (10/15) intron_pos 403:1 (11/15) intron_pos 454:1 (12/15) intron_pos 487:1 (13/15) intron_pos 586:0 (14/15) intron_pos 648:2 (15/15) BEGIN 1 MDEESGSSTD QAAPSDEQQE AGSSSAIGQE SRKTVVFQEP DIGFPSEHDQ LTTLHDSEEG 61 NRKMSLVGKP LTYKNYRTDQ RFRRMQNKMH NFLERPRGWK AATYHLAVLF MVLMCLALSV 121 FSTMPDFEVN ATIVLYYLEI VFVIWLATEY ICRVWSAGCR SRYRGISGRI RFATSAYCVI 181 DIIVILASIT VLCIGATGQV FAASAIRGLR FFQILRMLRI DRRAGTWKLL GSVVWAHRQE 241 LLTTVYIGFL GLIFSSFLVY LCEKNTNDKY QTFADALWWG VITLSTVGYG DKTPETWPGK 301 IIAAFCALLG ISFFALPAGI LGSGFALKVQ QHQRQKHLIR RRVPAAKLIQ CLWRHYSAAP 361 ESTSLATWKI HLARELPPIV KLTPNGSNNA TGLINRLRQS TKRTPNLNNQ NLAVNSQATS 421 KNLSVPRVHD TISLVSTSDI SEIEQLGALG FSLGWKSKSK YGGSKKATDD SVLQSRMLAP 481 SNAHLDEEEA VGYQPQTIEE FTPALKNCVR AIRRIQLLVA RKKFKEALKP YDVKDVIEQY 541 SAGHVDLQSR VKTVQAKLDF ICGKNIEKIE PKISMFTRIA TLETTVGKMD KKLDLMVEML 601 MGRQASQRVF SQNTSPRGEF SEPTSARQDL TRSRRSMVST DMEMYTARSH SPGYHGDARP 661 IIAQIDADDD DEDENVFDDS TPLNNGPGTS SC //