LOCUS       CCD65564.1               755 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans 4'-phosphopantetheine phosphatase protein.
ACCESSION   BX284606-1133
PROTEIN_ID  CCD65564.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="pnk-4"
                     /locus_tag="CELE_C42D8.3"
                     /standard_name="C42D8.3"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00006862"
                     /db_xref="EnsemblGenomes-Tr:C42D8.3"
                     /db_xref="GOA:Q18580"
                     /db_xref="InterPro:IPR002791"
                     /db_xref="InterPro:IPR004567"
                     /db_xref="InterPro:IPR015844"
                     /db_xref="InterPro:IPR035073"
                     /db_xref="InterPro:IPR036075"
                     /db_xref="UniProtKB/TrEMBL:Q18580"
                     /db_xref="WormBase:WBGene00006862"
     intron_pos      51:0 (1/8)
     intron_pos      113:2 (2/8)
     intron_pos      234:2 (3/8)
     intron_pos      287:0 (4/8)
     intron_pos      473:2 (5/8)
     intron_pos      528:0 (6/8)
     intron_pos      682:2 (7/8)
     intron_pos      724:0 (8/8)
BEGIN
        1 MDIAQRKIDF HRLVRDAPMI THICFDACSK TVKIVYSSSV PLSHTTLECT RILSKQSEDR
       61 IYCIQVQYPD FPLILNFFGE NCPLLKGTTV DFVVTASQNA EIEEVIRKVL DVELRHVDAF
      121 NGLVNGTSFL LRNIEAECFT YSFDESQEYE FQTLNNDSMF PYLLINIRTG VSVVLVEGEN
      181 QFKRLGGSSI GGGSFLGLTE LITGVSDIEE MMDRALQGSP DEFDIFIRDI YGDRASNFNM
      241 DPHLLAASFG RVTRGETVRR AENFDEQSKN NAILSLLRMI LYNVSQLAYM LSEISNVKRV
      301 FFNGFLVRNR PIVMKTLSFA CNYWSSGKLR AYFLRHENYT TGLGAFLENF PNADLYWKEY
      361 CSGSTALGRF VPVEPLETGF KTQTFALRCT GFKAAPFALL VDQDGKPDTI DFNKDEEARN
      421 FWIEILDKTI NDITKFAIAS QENCSNKEDL TNRAEDFQSD FVKTMDIIKE HHVAYGNSNA
      481 RNMLEVREQI LQEKGFDDIY VQKKHAENCT AIAELPRVLA KIDELKNTGD EKTVLEYVSR
      541 GLLAGNVFDW GAKEVVKMMN SESGLTFQTA IDHVENRPWL FDGFDSFYKK HKEYKSVLIF
      601 VDNSGFDYIL GIIPFARELL RNGSRVIICA NTSPALNDLT YREMVELAPE LKNADSDLAK
      661 FIDSNQMMFV QTGQESPCMD ARRVHQDLNE TVKKFNTDLV VIEGMGRALH TNFNVQFKCD
      721 SLKAAVIKTQ WLADRLGGKM FSVVFKHEHG VSVTN
//