LOCUS       CCD65563.1              1613 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Vitellogenin-2 protein.
ACCESSION   BX284606-1135
PROTEIN_ID  CCD65563.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="vit-2"
                     /locus_tag="CELE_C42D8.2"
                     /standard_name="C42D8.2"
                     /note="Confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00006926"
     intron_pos      292:0 (1/4)
     intron_pos      387:0 (2/4)
     intron_pos      1447:0 (3/4)
     intron_pos      1529:1 (4/4)
BEGIN
        1 MRSIIIASLV ALALASSPAF ERTFEPKTDY HYKFDGLVLS GLPSASSELS QSRISARARI
       61 QAVDDRYIHL QLVNIRMAAS HLPESEQMPS LNSMEQRELS EEYKQMLELP LRAQLRNGLI
      121 SELQFDKEDA EWSKNMKRAV VNMISFNPIA PRNEIEKIES SYDKEEQSEE NTSFFTNEKT
      181 LEGDCQVAYT VIREQKKTII TKSINFDKCT ERSEIAYGLR YSSECPECEK DTELIRPQTV
      241 YTYVLENEEL KESEVRSLYT VNVNGQEVMK TETRSKLVLE ENHSIKSHIK KVNGEKESII
      301 YSSRWEQLVE DFFKNGDKAE FAPFEKFPLD KKMHLIKTIT EQIQEVENNM PETSHFLARL
      361 VRIFRTTSTS QLKEIHETLY VKADKKIQSL MEHALAIAGT KNTIQHILVH MENEDILPLG
      421 QILKTIQETP FPSQSIAEAL IKFAESRVAK NNLVVRQAAW LAAGSVVRGI VDYKNIRPLV
      481 REDKRELKEK FLRVFMQQYK DAETTYEKIL ALKTIGNAGL DISVNQLNEI IVDKRQPLPV
      541 RKEAIDALRL LKDTMPRKIQ KVLLPIYKNR QYEPEIRMLA LWRMMHTRPE ESLLVQVVSQ
      601 MEKETNQQVA ALTHQMIRHF AMSTNPCYQR VAIVCSKVLS FTRYQPQEQM IASSYAQLPL
      661 FLQNSFSGAQ FDFAAIFEKN SFLPKDLHAS LDAVFGGNWN KYFAQIGFSQ QHMDKYVQMA
      721 LEKLESLEKE STTVVRGRRI QTGIKLLKEL AQKMNIRARP ATYTEKDAFA MVYLRYKDMD
      781 YAFLPIDRQL VENLIEKFTS NGKVQFSEIR RLLNQELEFE THHAAYFYEA IRKFPTTLGL
      841 PLTISGKIPT VISAEGQFSL ELEGTELRLT VEARPSVAAT HVYEMRMFTP LFEQGVKSVQ
      901 SVRAYTPIKI QAVAGMKRNF EIVYKVVVPE NQKSIVSLTT RPVVFLRFPG FSKFEYIEAE
      961 ERTVVVPQWQ QKTQEIEKVF NFLGLEVSTR GNILNQHTLE NWLLAEQDFE VSVENKNRPA
     1021 EFTARLTVGQ LEKTELSQIK YNKIFEKEFE LEQENTESRR EYFNKMVKNI QKEQGYKSVI
     1081 SLKLEAPRDY TMNTELTTVC DKQVRMCQWE VEIRRSPILE ETKEWTLRSQ LLVVRPEMPS
     1141 SLRQLRDQPH REVQLSLTST WGSQKKSEVT VNAQLQQSKE QKKYERNMDR QFNGMPEYEL
     1201 LIKAARLNQI NAVAEYKLTR ETEQVLARYF DLVKTYNYWT VSSRPENNEN DRVVVQLTVE
     1261 PMSRQYVNIT MQSPMERIEL KNVQVPRVYL PSIAQRSVKH QLTEASGSVC KVQKNQIRTF
     1321 DDVLYNTPLT TCYSLIAKDC SEEPTFAVLS KKTEKNSEEM IIKVIRGEQE IVAQLQNEEI
     1381 RVKVDGKKIQ SEDYSAYQIE RLGESAIVIE LPEGEVRFDG YTIKTQLPSY SRKNQLCGLC
     1441 GNNDDESTNE FYTSDNTETE DIEEFHRSYL LKNEECEAEE ERLSEKKNYR KYERDEEQSD
     1501 EYSSEETYDY EQENTKKSQK NQRSQKKSDL VEKTQIKEFS HRICFSVEPV AECRRGYEVE
     1561 QQQQRKIRFT CLQRHNRDAS RLLKESRQQP LQLDDYPVSF VESVKVPTAC VAY
//