LOCUS       CCD65393.1              1022 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Sodium-dependent transporter snf-12 protein.
ACCESSION   BX284606-2095
PROTEIN_ID  CCD65393.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="snf-12"
                     /locus_tag="CELE_T25B6.7"
                     /standard_name="T25B6.7"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004911"
                     /db_xref="EnsemblGenomes-Tr:T25B6.7"
                     /db_xref="GOA:O45813"
                     /db_xref="InterPro:IPR000175"
                     /db_xref="InterPro:IPR037272"
                     /db_xref="UniProtKB/TrEMBL:O45813"
                     /db_xref="WormBase:WBGene00004911"
     intron_pos      112:0 (1/11)
     intron_pos      238:1 (2/11)
     intron_pos      286:1 (3/11)
     intron_pos      317:2 (4/11)
     intron_pos      375:0 (5/11)
     intron_pos      450:2 (6/11)
     intron_pos      482:1 (7/11)
     intron_pos      525:2 (8/11)
     intron_pos      567:0 (9/11)
     intron_pos      627:0 (10/11)
     intron_pos      889:0 (11/11)
BEGIN
        1 MNGEWKSALR LQIEALAKRN ELHRKSSVDE IKKRTVDMDK RIVKLRELVG SSANDAALFY
       61 LECVCHADET ERLLNRGSSV GKEKKWKKVK RKTSSSVAPP LSRTISSLPG VSSPDVIQTI
      121 DVSALEDQTP QRPHWWDQFQ LYRRTDLLRF SKQNDRRELW RTQKDFFLSC LGFMVGVGHT
      181 MRFPAKVYQH GGGVFFIPYL FSLIFFGLPL VFLHLSLGQY TGQAANTAFQ RLMPIGSGVG
      241 WALVVIAIPV AVYYNIIVAW AIHYFFQSAK GLLLGDELPW ETCRDEWQLD NRCCNLHNLH
      301 SCFNSTNSIT APEAFFHSEV LSLSTFGDFA LGPLQSHLVL SLAAAWLLVF FGVFKGLGSI
      361 AQTMNVTATV PYLLLSILLL RGISLPGANK GLTFLFTVDS TKLWKWQIWK SAAEQVFYEL
      421 GIDAGPLISM AAFSRYRNNI YRDSVLLVIM DALTSCLSGM VIFSFVGFIA SESNSNVNDV
      481 LKHDPLYLSF TVYPGVTSFM YWGGLWATLF FGMLVLAAID AEFAWLEMIA SAFMNHFSMK
      541 NKAVENRLLA FLCLAGFFLG LPLCAQGGIF VFHAIENLNA NWNSFSLALL SVAIVCYVYG
      601 IDNYLTDISA MLRVPRIQIS KATRLKEKLI YFFGPGGIYI KFSLCFICPV ILTVLLVASV
      661 LGYQRISFAG RPIPIDYEIV AWIVMIGPLL VVPLVAFMQI RQIRNEGKLL KSLFDTSEWR
      721 ESQDDSLEPK DLYMRQSGKF ESPPNRRRTP TIFTHRENTY MYIDSRGPTV RSRVFPLGAS
      781 LDPYGWKAGR LRDRQQQIEE TASNYSEEDS ATTNSFMAST VKHNDDMELT LFGSPPAILG
      841 DDEKIMTTRF SESMPVNYKC RNVEVPRIPN KLPQNMERMA RKTRKKRSSP SASDPPVPTS
      901 PLPPPPKLQH CRSEPPMMNS KESHSPEIIT PGDDSPSISN SSDDSSDDCF RRATVIRRKT
      961 SDDDAFTHFS TATAESISIT PLDFPRQRSL SSVAIYDQEQ KNGRSKVLSQ LKRPKPIDMP
     1021 PK
//