LOCUS CCD65291.1 725 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Protein kinase C protein. ACCESSION BX284606-2170 PROTEIN_ID CCD65291.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="pkc-2" /locus_tag="CELE_E01H11.1" /standard_name="E01H11.1d" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00004033" /db_xref="EnsemblGenomes-Tr:E01H11.1d" /db_xref="GOA:G8JY36" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR000719" /db_xref="InterPro:IPR000961" /db_xref="InterPro:IPR002219" /db_xref="InterPro:IPR008271" /db_xref="InterPro:IPR011009" /db_xref="InterPro:IPR014375" /db_xref="InterPro:IPR017441" /db_xref="InterPro:IPR017892" /db_xref="InterPro:IPR020454" /db_xref="InterPro:IPR035892" /db_xref="UniProtKB/TrEMBL:G8JY36" /db_xref="WormBase:WBGene00004033" intron_pos 4:0 (1/14) intron_pos 26:1 (2/14) intron_pos 59:1 (3/14) intron_pos 82:2 (4/14) intron_pos 116:1 (5/14) intron_pos 144:0 (6/14) intron_pos 224:1 (7/14) intron_pos 277:2 (8/14) intron_pos 358:0 (9/14) intron_pos 465:0 (10/14) intron_pos 533:0 (11/14) intron_pos 603:1 (12/14) intron_pos 650:0 (13/14) intron_pos 676:0 (14/14) BEGIN 1 MHRSDESRMS FEHRSVVRLF SNSSTTSNGS RKTSVPSAVL ASAPLMSAAI GDGLGTQLSQ 61 RIEGKAFVRR GALRQKNVHE IKSHKFIARF FKQPTFCSHC KDFLWGITKQ GFQCQVCTLV 121 VHKRCHEFVN FACPGADKGV DTDDPRQQHK WKVQTYSSPT FCDHCGSLLY GILHQGMKCQ 181 SCDTNVHHRC VKNVPNMCGT DNTEKRGRLR IEAHIENDQL TIKILEAKNL IPMDPNGLSD 241 PYVKCKLIPE DSGCKSKQKT KTLRATLNPQ WNETFTYKLL PGDKDRRLSI EVWDWDRTSR 301 NDFMGSLSFG ISELMKEAAS GWYKLLSAEE GEFYNINITP EYDEDMEKVR KKMNENFITR 361 DNSSSKPKDP AAPRASTLPL GSSNHNVIKA SDFNFLTVLG KGSFGKVLLG EQKTTKELFA 421 IKVLKKDVII QDDDVECTMT EKRVLALPEK PSFLVALHSC FQTMDRLYFV MEFVNGGDLM 481 YQIQQVGKFK EPVAVFYAAE IAVGLFFLHS KGIIYRDLKL DNVMLERDGH IKITDFGMCK 541 ENIFGDATTK TFCGTPDYIA PEIILYQPYG KSVDWWAYGV LLFEMLAGQP PFDGEDEDEL 601 FTAITEHNVS YPKSLSKEAV SLCKALLIKN PSKRLGCTGD DESASRDIKE HPFFRRIDWF 661 KIETRQIQPP FKPKLKSADD TSNFDSEFTH EVPKLTPIDR LFLMNLDQTE FEGFSFVNPE 721 YVQEC //