LOCUS       CCD64985.1               778 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans RBR-type E3 ubiquitin transferase protein.
ACCESSION   BX284606-1906
PROTEIN_ID  CCD64985.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="C17H11.6"
                     /locus_tag="CELE_C17H11.6"
                     /standard_name="C17H11.6c"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00015926"
                     /db_xref="GOA:Q86ME0"
                     /db_xref="InterPro:IPR001841"
                     /db_xref="InterPro:IPR002867"
                     /db_xref="InterPro:IPR013083"
                     /db_xref="InterPro:IPR031127"
                     /db_xref="UniProtKB/TrEMBL:Q86ME0"
                     /db_xref="WormBase:WBGene00015926"
     intron_pos      21:2 (1/14)
     intron_pos      78:0 (2/14)
     intron_pos      115:0 (3/14)
     intron_pos      142:2 (4/14)
     intron_pos      179:2 (5/14)
     intron_pos      252:1 (6/14)
     intron_pos      323:1 (7/14)
     intron_pos      391:1 (8/14)
     intron_pos      440:1 (9/14)
     intron_pos      489:1 (10/14)
     intron_pos      512:0 (11/14)
     intron_pos      572:1 (12/14)
     intron_pos      607:1 (13/14)
     intron_pos      668:2 (14/14)
BEGIN
        1 MTSVSSSDVR SNVSGSISSK RYRGSDTGSG MDSEAGETCA EMLLSSRNQD DEEQSDEKQL
       61 SQSLPDTPKT PSEVGKKGKG KMKECPLCAA KMPGSAFPKL KGCQHRSCRA CLRQYVELSI
      121 TENRVEVPCP ECSSYLHPND IKMLIGDIPT LIEKYEAFSL RRYLMTEADA RWCPAPDCGF
      181 VFIATKCAAC PQLKCQRPDC GTLFCYHCKR EWHSNQTCDE ARRPEKRKSR GLAFEEIMRT
      241 GFHQSADSTL KPGDVKACPR CKTYIVKMDD GSCNHMVCTM CNAEFCWLCL KEISDLHYLS
      301 PTGCTFWGKK PWTRKKKLLW QLGTLIGAPV GIALIAGLSI PGIVFGVPVF VGRKVHQRFK
      361 YKSKTKRRFL TATCVVGSLV VSPVMAVMAV GVGVPIMLAY VYGVVPLSLC RNGGCGLSSS
      421 DSSLALADID EEQLYGTPGA SAPVDLSQFM TDASKREDIV SIDPSILSMP REMKTRYYPK
      481 GRRTSLESGE RVNYEEASVK AMAGSHHYDD KSVHTLCSGH EVTSLNDEQS STKALAGSVM
      541 DTKSMSESMY RHMILTKYAE KQHHQENDDD HDEQGGSDDQ PSTSSAVHHI KGPKLSSSSI
      601 HRGCVIERDD DGLLFTEEGA ALLINSPPAM RSSGSVNIDP IDLFKIRSWL DNMKQMVATD
      661 APQETPYEPS TRPSSKLRRS GSGKSVHTVA TFPVNLNTGN TVNRQGLSNL SKPEIVQNMS
      721 NAPSEAGITV AAPRSPTELE ANGENAGDDS VSTSSSSRSQ KKKKRRFGIF SNWFNKTK
//