LOCUS       CCD64694.1               729 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans ShKT domain-containing protein protein.
ACCESSION   BX284602-1236
PROTEIN_ID  CCD64694.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="skpo-2"
                     /locus_tag="CELE_C16C8.2"
                     /standard_name="C16C8.2"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00015841"
                     /db_xref="EnsemblGenomes-Tr:C16C8.2"
                     /db_xref="GOA:P91060"
                     /db_xref="InterPro:IPR003582"
                     /db_xref="InterPro:IPR010255"
                     /db_xref="InterPro:IPR019791"
                     /db_xref="InterPro:IPR037120"
                     /db_xref="UniProtKB/TrEMBL:P91060"
                     /db_xref="WormBase:WBGene00015841"
     intron_pos      20:1 (1/13)
     intron_pos      58:2 (2/13)
     intron_pos      170:0 (3/13)
     intron_pos      243:1 (4/13)
     intron_pos      266:0 (5/13)
     intron_pos      317:2 (6/13)
     intron_pos      356:0 (7/13)
     intron_pos      387:1 (8/13)
     intron_pos      418:2 (9/13)
     intron_pos      454:0 (10/13)
     intron_pos      619:1 (11/13)
     intron_pos      658:2 (12/13)
     intron_pos      711:2 (13/13)
BEGIN
        1 MRKNSHLLVL FLLAIGTFQL ANADEENEVD ASGDSPPSVE GEVVEEAKST AADDENVDKS
       61 CKDRHDLCKF WSSIGECTSN KNWMEDHCPV SCDFCNGITT CIDRHRLCGF WATIRECETN
      121 AVWMLSNCPK ACKACKGRSV TLGGTGPGGT FKEDDCTFIT TNEDTSIRKT LSIRDVRDSN
      181 ANFNCAPTQE TPNCNRNLCY HLRYRSFDGT CNNLKKPMIG SAFTALMRLK NPMYDNGLNA
      241 PTSSFLRSRP SARDASRLLL SSSTQIQHHS NALLMQWGQF IAHDLSKTTM LNNQECAACT
      301 SNKGRCTSVF LSRSDPTFGR FMCLPVARST PVCGTGVSNF REQFNENTAF IDGSMIYGSS
      361 DRDQFLFRQG AFLKTKLINN RVFPPVDKNN NVVAGDDRAN IFVGLASLHV LYLRQHNRIA
      421 ATLQRVNPHW DQERVFHESR KIVGAMIQRI TFTEYLPKVL GVAFEERIGA YPGYDPNIDP
      481 SVANEFTSCA FRFGHGMIQE FYPFLNEKFQ HVGGIPFNDG MFKSTHILNN GIDPLIRGLM
      541 TLPAKMPQRL TPAVTERIFG NSDLGSINIQ RGRDHGVPPY TVWRKFCGLP EVKDFEGLKQ
      601 VISNQVVIDN LKVVYKHVDA IDMYVGSLLE DPVKDALVGP TLSCIIGEQF KRTRNGDRLW
      661 YENSKVFSPE QLLQIKKITM SRVLCDAGEH FPMVPRKAFS VFKPTAHNLV KCDEIPDLDY
      721 NAWKEELAV
//