LOCUS CCD64631.1 581 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Protein GPR107 protein. ACCESSION BX284606-1389 PROTEIN_ID CCD64631.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="C15H9.5" /locus_tag="CELE_C15H9.5" /standard_name="C15H9.5" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00015801" /db_xref="EnsemblGenomes-Tr:C15H9.5.1" /db_xref="EnsemblGenomes-Tr:C15H9.5.2" /db_xref="GOA:Q18024" /db_xref="InterPro:IPR009637" /db_xref="UniProtKB/TrEMBL:Q18024" /db_xref="WormBase:WBGene00015801" intron_pos 26:0 (1/13) intron_pos 72:0 (2/13) intron_pos 99:0 (3/13) intron_pos 137:2 (4/13) intron_pos 202:0 (5/13) intron_pos 230:2 (6/13) intron_pos 283:2 (7/13) intron_pos 334:2 (8/13) intron_pos 374:0 (9/13) intron_pos 417:2 (10/13) intron_pos 465:0 (11/13) intron_pos 535:2 (12/13) intron_pos 571:2 (13/13) BEGIN 1 MWRRILLLSI VISTITGKFH HLALRADSRR NIIISDFSYG TNGTLSIAIN NFTVPEKIKD 61 SVDSTENADK LGVIGFSLSL GSSITRGVGS NPHVCQLQQT DQGYDAIFFF ADLPNKQLRV 121 YRSGIGRYIQ ICGTAHECQN TDAIRTPKPE ELQPESSSGP VEQRGWFRNL FGRFLNPGAP 181 QIAYDNYIPL QVQNENQFST NMSIRFDGKI VGQYVFMFHN CYNYRAHGYS DRVAVDLTVD 241 LVERNKHSYL SLQEIAKPEI YLYMSILYFG LAVYWSHLLC RSNSENIYRV HKFMAVLVFL 301 KALSVFFHGL NYYFLSKYGM QKEIWAVLYY ITHLLKGLLL FGTLILIGTG YTFIKQFLTD 361 RDRKVFMFVL PIQVIDNIIL IILNESEIGT QNHETWLKLF VILDLFCCAL VAFPIVWSIQ 421 HLVEGATTDG KAAANLEKLR LFRQFYILVV VYIYCTRFFG FILLHLMPVN LQWTIVAAVE 481 MVTFAFFIIV GYKFRPANSH NYLLLNSDFD SYDVETSPKE DRKDKENNEQ EIDEQFLTKA 541 YSDANVSRRL VSDESSNNQT DYPHQKLLKK PSQTYEQSLL D //