LOCUS       CCD64612.1              1147 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Sex-determining transformer protein
            2 protein.
ACCESSION   BX284602-2498
PROTEIN_ID  CCD64612.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="tra-2"
                     /locus_tag="CELE_C15F1.3"
                     /standard_name="C15F1.3b"
                     /note="Partially confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00006605"
     intron_pos      62:0 (1/20)
     intron_pos      99:2 (2/20)
     intron_pos      132:0 (3/20)
     intron_pos      197:1 (4/20)
     intron_pos      235:0 (5/20)
     intron_pos      279:0 (6/20)
     intron_pos      506:0 (7/20)
     intron_pos      551:1 (8/20)
     intron_pos      639:1 (9/20)
     intron_pos      677:2 (10/20)
     intron_pos      710:0 (11/20)
     intron_pos      736:0 (12/20)
     intron_pos      767:2 (13/20)
     intron_pos      801:1 (14/20)
     intron_pos      826:0 (15/20)
     intron_pos      886:0 (16/20)
     intron_pos      917:2 (17/20)
     intron_pos      954:0 (18/20)
     intron_pos      988:1 (19/20)
     intron_pos      1044:1 (20/20)
BEGIN
        1 MKLKYNKLLV SVVIVTFVTF GLLLAECFGK SIDYQEKSIF PSFVSQGFFE TRTNNEEYII
       61 EKIAQTQENG VDMRSTLHFT QHGYLLNNIS NLKIKFRQKT YTLNDVCFKP HITIFQQSSS
      121 SDQNEYPHYI QRLLLEMQRL SPCLIVTPLN CFYDIYRIHG EISNWNKNTD FLNRRLRNSY
      181 IEAIGENDER PYVKSNYGPS LIKSWADHMF DLPSKSFTNS TKDALFQKIK LWLLSIEPRQ
      241 KTCAASIHSC DTPLDSEHYF NICTDMQSVD NFAEKKTKFK LEDVDEEFAM NLDCVDDQEQ
      301 FIEWMQELEI RKMYSHVTEK PDYPNVVNQT CDKIFHDLNS TGIEFFDGSR SFSSTKSQFD
      361 TMQTEIVLLT PEMLLSAMQH SDFVNGFESI WTIEKAEELI HEFRLALKEE TEKFKENRMS
      421 KMIRVTSRVL DNTVTTKLQS FSEKQTIHFV VNVHSLIVIL FTIFVWSGAP LRSAFMFFVR
      481 DALTCLLFCF VCSTDGVIVL DTELIKYIIV LTLANLYFTT RSSFCTERLS RCIQREKRFP
      541 INSNFASLIT VDTMTDSRQI QYFLSTVTKY QAAQDSYSNE LFERFPKNWG CTSILIFPIV
      601 FVYWYFIDSN FDKICVSVLP SFCLAAGEEL FAKNMFWKER EAMQAKQRLE NEEQAESITG
      661 SSLEKLFAGN KPVSNTDKAN IVKKSSIIRN QKPCLQDLSP GTYDVSNFMK YPHQASRIFR
      721 EKIIGLYLRI LKLRTLGVIL CIPAILLIVI SIGLLFIPVK RETLHTDSKQ DDIFIEFEIF
      781 NFSTNWKIVN QNLKQFSEDI ESIGTLYTIS NWQKSFERFE QETNKNASAE WNILFKWIND
      841 EPINSAVTLF SEKSSGNQTI ANPFKFRLRY GFDAKNETTV IEIVQKIDEL LSKCSKNLSP
      901 KAVGVLYEHY HRIAVVWNLF AFNQLTTAGI FIILLSIITF IFAITPTIKA TFLFSLLVVG
      961 TQIEVAALVH LFSLDHHQIY TNLALFAGFL AAWDPFCALL RYRRRILYKS ETRRTPELAS
     1021 KRRVLLPIVA TADIAQFFVL LITEFPKREV TCQNWWPFSS SRSSICSFFF HSHPSSIILA
     1081 TLSIFRQYIY LFSLFSFSHS SSDVSNKKSR GYCRCMSCFS IFFQRVWPQE HWNTANNEKG
     1141 TQKESGC
//