LOCUS       CCD64607.1              2432 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Spectrin alpha chain protein.
ACCESSION   BX284606-670
PROTEIN_ID  CCD64607.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="spc-1"
                     /locus_tag="CELE_K10B3.10"
                     /standard_name="K10B3.10b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004951"
                     /db_xref="EnsemblGenomes-Tr:K10B3.10b"
                     /db_xref="GOA:Q21408"
                     /db_xref="InterPro:IPR001452"
                     /db_xref="InterPro:IPR002017"
                     /db_xref="InterPro:IPR002048"
                     /db_xref="InterPro:IPR011992"
                     /db_xref="InterPro:IPR014837"
                     /db_xref="InterPro:IPR018159"
                     /db_xref="InterPro:IPR018247"
                     /db_xref="InterPro:IPR035825"
                     /db_xref="InterPro:IPR036028"
                     /db_xref="UniProtKB/TrEMBL:Q21408"
                     /db_xref="WormBase:WBGene00004951"
     intron_pos      68:2 (1/13)
     intron_pos      97:0 (2/13)
     intron_pos      139:0 (3/13)
     intron_pos      666:0 (4/13)
     intron_pos      1053:0 (5/13)
     intron_pos      1105:0 (6/13)
     intron_pos      1110:0 (7/13)
     intron_pos      1178:2 (8/13)
     intron_pos      2000:2 (9/13)
     intron_pos      2193:0 (10/13)
     intron_pos      2240:2 (11/13)
     intron_pos      2341:2 (12/13)
     intron_pos      2391:0 (13/13)
BEGIN
        1 MADSNDTHAP PEPVLEVPPP QEIRILETAD DIHQRRQEVL GHYSIFKDHS QTKRDRLEEA
       61 RQFQYFKRDA DELNVWILEK LQTAQEENFR DPSNLQAKIQ KHEAFEAEVQ AHAKTIANLD
      121 KTGNAMIQHN HFASEHIKKR LEELHALWDK LFFKLKDKGI KLQQALKLLH FIRQCDEILY
      181 WIREKETYVT AEDMGMDLEH VEILQRKFDD FLKELGNHQY RINEINQAAD KLVEEGHSEH
      241 DQIYKKRDDV NDAWHRLNTL AATRKEGLFG AHQVQRFNRD ADETLAWIGE KDLALSSDDY
      301 GRDLNNVQAL QRKHEGTERD LAALEGKMLQ LEKEAHKLAE THPDRAEAIH QKNDDTKAAW
      361 NALKEKAQHR KDGLERSFQL HRFLADYRDL ISWIGDMKAV IGADELAKDV AGAEALLESH
      421 QEHKGEIDAR ADSFNQTASA GQKLVEMGIP ESPEVQEKLE KLDHEKSSLL GLWEERRILY
      481 EQCMDLQLFY RDTEQAETWM NKQEAFLANT DLGDSLDSVE HLIKKHEDFE KSLAAQEEKI
      541 NALDEFATKL IQGQHYAADD VAERRQALLD RRRRLLDRAR QRGNALKESY KRQTFDRDCD
      601 EMVSWITEKL STARDDSYLD PTNIRGKLQK HINFEQELKA NENRLDDIRS TGEQIIDSGH
      661 FAADHIGDRL RQVNNLWNEL VDATNKKGAK LREAGNEQQF NRNIEDVEAW LSELEGQVAS
      721 EDYGKDLVSV QNLQKKIGLI ESDFNAHNDR VDGIKQLAQQ FQEEEHFNAP VIVRKQENLQ
      781 QRYNALRDPL EKRKRKLGES HQGNQLFRDI EDELAWIREK EQVAGSTNRG RDLIGVQNLI
      841 KKQQALIAEI ANHDSQIESV SSAANDMIQQ GHFLAPEIRD KLAQLRDNWR ILKSKAEKRR
      901 TDLDDSLQAH QYLSDANEAD AWMSEKEPIV GSTDYGKDED SAEALLKKHR ALLSDLEAFK
      961 GTIEDLRKQA SQCKYQEQPM GQLGRDCVLA LYDYQEKSPR EVSMKKGDVL TLLNASNRDW
     1021 WKVEVNDRQG FVPAAYVKRI EPGTAQQHAQ QQVNSIGGKQ SEIEDKYQRL MMLGETRKRK
     1081 LEEACKGYQL LREANDLAEW IKSRTNMAEE AVAAQQEIGT DLEQVEVLQK KFDDFKGDLK
     1141 ANEVRLQEMN QIATALTSVG QTETAVRIRQ QIEDLNARWR ALEEQTEQRE QQLGSAHEVQ
     1201 RFHRDVDETR DWIQEKDDAL DSEDFGRDLR SVQALQRKHE GVERDLAALG DKIKSLDEKA
     1261 NRLRQSHPEA AEQIYDLQRE LNEQWNRLTS KANNRKEKLL DSYDYQRFLS DYRDLMQWIA
     1321 SMNQLVSSQE LANDVTGAEA LLERHQEYRT EIDSRAATFQ AFDQFGNQLL NSHHYAAGDI
     1381 ENRLQGVNEA RKGLEDAWVA RRNILDQCLE LQLFYRDCEQ ADTWMSAREA FLAQEDPSGD
     1441 NVESLIKKHE DFDKAINTQE EKIKGLKLFA ESLIKNNHYD SPAVTRKRDQ ILDRWNGLKE
     1501 ALIQKRFKLG ESQTLQQFSR DADEIENWMT EKFQIAQEEN YRDPTNIQQK HQKQQAFEAE
     1561 LHANSDRIAA IIQAGNNLIE NAKCGGGEAA VSARLKALND QWDLLVKTTT EKSYRLKEAN
     1621 KQKSFMAAVK DLEFWLGEVE ILLQSEDYGK DLASVENLLK KHSLLEADIV AHQDRVGEMN
     1681 EQADSLLEND QFQGQQIAER RKLIADRYDG VKKMATDRRD KLSKALNVHQ FFRDIDDEES
     1741 WIKEKKLLVS SDDYGRDLPG VQNLRRKHRR IDTELASHEP QVSLVKLKGE ELLRSAAEAG
     1801 VGEDQIKKRM EDLEQSWGQI RDLTGNRHQR LDESEAFQAF LGDVEEEEAW MNEKQQILGS
     1861 DNFGENMAGV QGLLKKHDTF QVDLELHKQR VADLINKGDT LIHNGNHHAP HIKQRCDQLR
     1921 ARLIEIESMA EGRLAKLRDN SAYLQFMWKC DVVESWIAEK EQQVRSEDFG RDLSSVQILL
     1981 TKQEAFDAGL NAFEHEGIQR ITELKDQLVS SEHQQSPAIE KRHTNVIQRW QNLLAHSEAR
     2041 RQKLLKMQQQ FKQIEELYLA FAKKASTFNS WFENAEEDLT DPVRCNSLEE IRALRDAHGE
     2101 FQRSLSSAEE DFRQLQDLDR RIKSFNVGPN PYTWFTMDAL EDTWRNLQRI IKEREQELAR
     2161 EHQRQEENDK LRREFAKLAN AFHAWLTNTR QEMMEAGGTL EEQLDAVERK AKEIKANKGQ
     2221 LRQIEEKGAM LERNLILDNR YTEHSTVGIA QAWDQLDQLA MRMQHNLEQQ IQARNQSGVS
     2281 EEALREFSMM FKHFDKEKTG RLDHQQFKSC LRALGYDLPM VDEGQPEPEF QRILDIVDPN
     2341 RDGYVTLQEY MAFMISKETE NIQSSEEIEM AFRALSKEFR PYVTAEELYA NLTPEQAEFC
     2401 IRRMKPYMDA ISGRSIQGGL DYEQFVHALF QS
//