LOCUS CCD64584.1 644 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Zinc metalloproteinase nas-33 protein. ACCESSION BX284606-1485 PROTEIN_ID CCD64584.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="nas-33" /locus_tag="CELE_K04E7.3" /standard_name="K04E7.3" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00003551" /db_xref="WormBase:WBGene00003551" intron_pos 28:1 (1/18) intron_pos 46:2 (2/18) intron_pos 78:0 (3/18) intron_pos 106:0 (4/18) intron_pos 144:0 (5/18) intron_pos 175:0 (6/18) intron_pos 215:1 (7/18) intron_pos 253:2 (8/18) intron_pos 276:0 (9/18) intron_pos 303:2 (10/18) intron_pos 344:0 (11/18) intron_pos 386:1 (12/18) intron_pos 426:1 (13/18) intron_pos 456:0 (14/18) intron_pos 482:0 (15/18) intron_pos 530:1 (16/18) intron_pos 581:2 (17/18) intron_pos 611:1 (18/18) BEGIN 1 MLFVSILISQ FVTCLTQPDF FERPPPPDWF FPGPLRPWGP PPPWHRNRGP PPFGPPPPWD 61 RPPPPWRRPP WHRRPPWGLP PPPPPPEPEP QQDQPQVMFS QDIDKVVNSV NQNTAAFQRP 121 GESYDKVIQI MSSYFNRKSG SQYDINTVIP SSGIYNNEMA ANSKIAAVMF ESDMALTVSQ 181 MNKVAQNGFR VKRKMNLNGT TWSRNIPYRF LDTDGNWQSQ ITNGLRHYER NTCIRFSLNG 241 GGSDYLVFSK GEGCYSSVGR LGGPQEISIG DGCETLGIIT HEVGHALGFW HEQARPERDS 301 YVRINRQNAI NGLEGQFDKR SWSEVNEYSL PYDYGSVMHY GPKSFSKSST MNTVEPVDPA 361 FINTIGNRVE PSFLDLKLLN TAFCSNICTN RINCQHGGYA DPNNCGQCTC PTGLEGTYCE 421 RLQTSNCGVE LPRADYSWRN ISYSGSSDCY WRIVSANGGN VRFELTYVMY RCSPVCEEFV 481 EMKAEYSHEA TGYRQCCKAV LGERISKGNS VLIISKATQN SQFVLRYRED GTAPTQRPPP 541 VRVAAPRSYS LLWSGWTRCS ENCGSCGTQY RERCTSTTNC LRSAKQTRVC NTQPCAQGTT 601 RGKRSVLQTQ ISHRVKRLNG WCCARFVLSR GVCVPVRTGV THPN //