LOCUS CCD63510.1 490 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Probable G-protein coupled receptor npr-8 protein. ACCESSION BX284606-1709 PROTEIN_ID CCD63510.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="npr-8" /locus_tag="CELE_C56G3.1" /standard_name="C56G3.1a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00016984" /db_xref="EnsemblGenomes-Tr:C56G3.1a.1" /db_xref="EnsemblGenomes-Tr:C56G3.1a.2" /db_xref="EnsemblGenomes-Tr:C56G3.1b" /db_xref="WormBase:WBGene00016984" intron_pos 33:0 (1/7) intron_pos 98:0 (2/7) intron_pos 148:2 (3/7) intron_pos 199:0 (4/7) intron_pos 360:0 (5/7) intron_pos 430:2 (6/7) intron_pos 459:2 (7/7) BEGIN 1 MEVKDIDNYC DRGISPNASN YLTYPFDGLC LQKFFYQLQT SLRRFTPYEE IIYTTVYIII 61 SVAAVIGNGL VIMAVVRKKT MRTNRNVLIL NLALSNLILA ITNIPFLWLP SIDFEFPYSR 121 FFCKFANVLP GSNIYCSTLT ISVMAIDRYY SVKKLKIASN RKQCFHAVLV SLAIWIVSFI 181 LSLPLLLYYE TSMLYVMREI RVVDQSGQEV IRSYGWRQCR LVSAGRLPDI TQSIQLLMSI 241 LQVAFLYIVP LFVLSIFNVK LTRFLKTNAN KMSKTRAPPK RFDRSDSHHN SLKNNNNHTS 301 SLRSPSMPSI RSSITERNKT NQRTNRTTSL LIAMAGSYAA LWFPFTLITF LIDFELIINQ 361 DYVNLVERID QTCKMVSMLS ICVNPFLYGF LNTNFRHEFS DIYYRYIRCE TKSQPAGRFH 421 HDVSSIAHHR QDSVYNDEAT LLTTGRQSNG KDGSSSPIGF RSSVRVCSGQ TKMIGDRIVL 481 DDDIEKDSFV //