LOCUS CCD62918.2 677 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans SRR1 domain-containing protein protein. ACCESSION BX284606-67 PROTEIN_ID CCD62918.2 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="M02E1.1" /locus_tag="CELE_M02E1.1" /standard_name="M02E1.1b" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00019733" /db_xref="EnsemblGenomes-Tr:M02E1.1b.1" /db_xref="EnsemblGenomes-Tr:M02E1.1b.2" /db_xref="UniProtKB/TrEMBL:H2KYF4" /db_xref="WormBase:WBGene00019733" intron_pos 24:1 (1/10) intron_pos 80:2 (2/10) intron_pos 122:0 (3/10) intron_pos 233:2 (4/10) intron_pos 311:1 (5/10) intron_pos 327:1 (6/10) intron_pos 387:0 (7/10) intron_pos 520:0 (8/10) intron_pos 541:1 (9/10) intron_pos 672:1 (10/10) BEGIN 1 MAKNKTYDLS KLEEWLTDDS VAHEILNYHK SANAFKRLVK SGKKRAVTLD AFCEGGERIE 61 VTADPKNLKL ILLMWEVIKK VYFNLTTFQV EIDEALEKSC CLYLEIKIFQ FKKVIESWKE 121 NGKLPPSSMD YGDWDCSKAS AKVAEQMILI ARTYAGMTEE VAVPDFVALE NMLEHHKLRW 181 EDHKQKKPIV MAGAGDAQTG CYLALRTLRK VTMFVKDEEM ESGREMCNAI STILTTHFAK 241 RTGELKINTM NSFYKEYSRD DICTEATFFF LPNISKLGMA MFAEVYACHI PFFSVVMSNR 301 PVYWYMGHPR YRLLANSGRY RPFSFKRPVP NEIHLVEKQK RVSWMQSRNY YRYRTHKVDF 361 KKLLKKQKEF PKARRFTRNF LYNWEKKNRY FKKTDLILAV TRGRKDQTDH HAKKVTLPEK 421 KTDHIKMVVK QDVVQEEISV HPMFLDEMDI ADDDEYDAIA GPEHLPGSSD FAADSSSNEL 481 ATSTTPVSTS SEFSLPSSTA ELKKEDSPGG CSGFQNEIQS SIKQNASSDD DSKTSKISTP 541 RMHATSETNQ LNSMDFTLNS DEKVDFALER PIAATPPEEE PPETMLAEEE EQNEWQQLLM 601 GTKYKCATLG DVVRQSVIHP NYAGRPDKKS NRLVSNKREQ RKRKPEKDVT EPASEEDPYM 661 TAERKIDEAI ASPTTSP //