LOCUS       CCD62844.2               985 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Egg-laying defective protein 27 protein.
ACCESSION   BX284602-2430
PROTEIN_ID  CCD62844.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 15279421)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 15279421)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="II"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="egl-27"
                     /locus_tag="CELE_C04A2.3"
                     /standard_name="C04A2.3b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00001194"
     intron_pos      17:0 (1/9)
     intron_pos      38:2 (2/9)
     intron_pos      93:0 (3/9)
     intron_pos      153:0 (4/9)
     intron_pos      226:0 (5/9)
     intron_pos      302:1 (6/9)
     intron_pos      367:2 (7/9)
     intron_pos      743:0 (8/9)
     intron_pos      913:0 (9/9)
BEGIN
        1 MKQERAELEI NPHLCPQSLN RELFNSELQI TQPVSCLRGK CIVEYVKDVR HARTVADFSL
       61 DNDTFFFCLH YNQDSTKLAS THYAIRVGTS FQATLPPMAE CSVGDDSDRD ELLYRPNSIE
      121 SGEEEDYIKL ARCYRTYTLS GNHMLDSQKN ARVSDLLMDE AIIQLHRSGY KIDDALSELN
      181 ANDIILTTDV DNMTQDDAKK FAKGIKQLGK NFSRIHRELL PHHSREQLVS YYYLWKKTPE
      241 ATKPKQAARR VNPTSIKRPT KEKVKASRPT STEYLDFDSA SESDVENNGP SGRACHHCYG
      301 AESKDWHHAN GLLLCTDCRL HYKKYGQLRQ IANRPSQVPA CLFKRSNSDE EESGVRTRAG
      361 KKEQRRRTPS SMSETPDRRS PSTVSNGAPN LTAEETPTKK LNGSVKRAPK RPLHNGVINN
      421 VEKSNSSEEP ASPTTPPPTL TNGLTNGHGP ESSTPNGETI SKRMKVEPSY DDDDDEEEGK
      481 MTIDEGDDDP MPVLNGFKKE ESVEEIKLEL NGTIKKENGV ETDPTTPTCS MEAENEVCET
      541 PAVVSVEIRD ETNGETNSDL KDDENVEPDS PEDTFELGSN VEFETKNAMF VRSIVRSCGP
      601 RCARTDLIFK IKVGGVWEKS IKEKEERKKV HLQNQRIQDS EKVAIQQNQI KKEQQQSQPT
      661 PQQIHQQQAQ QNAQHLQQLQ QAVMLGHLPP EVLRQMMPPQ FGVDPTAILM QQMMAGQQSQ
      721 GVNAAFQHQM ALQQQLEAHQ VQFQLMMAHQ HQQKMIAEQQ QQQRHAAAQQ LREREQREQR
      781 ERERERQHQQ QAQQALHQQQ QQHAAAAANQ LNPAMMQMMA LMANSAASQQ DIARLMEMAA
      841 QQQQQQQQAA QAQAQRDQER ERREREARER EAAREREREQ AAREAAARDQ AAREHAQAVQ
      901 AAAAAAQQAQ ALTPDMQHMH LLQQLMLNPA LMMQLQQAQA QQQQQQPQVT NPLQMLQHGM
      961 AAQSANQAEM MRRIHPEPAM RPQHQ
//