LOCUS       CCD62787.1               730 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Choline transporter-like protein 1 protein.
ACCESSION   BX284606-1205
PROTEIN_ID  CCD62787.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="chtl-1"
                     /locus_tag="CELE_F35C8.7"
                     /standard_name="F35C8.7b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00018037"
     intron_pos      10:1 (1/11)
     intron_pos      27:1 (2/11)
     intron_pos      46:2 (3/11)
     intron_pos      102:2 (4/11)
     intron_pos      197:1 (5/11)
     intron_pos      248:2 (6/11)
     intron_pos      387:2 (7/11)
     intron_pos      589:0 (8/11)
     intron_pos      637:1 (9/11)
     intron_pos      671:1 (10/11)
     intron_pos      695:1 (11/11)
BEGIN
        1 MKQYNYSYEA APQFCRNSAM AIQTAPGTAE SKRDNNPMSD FNLQRRGCTD VFCCFLFFVF
       61 LCGWVVVAGF GIMWGDPQRL IYPTDSEFRR CGVNLEGSYN FSKRPYLFYF DLTKCISYAT
      121 ALGGCQTTQL CVKECPSTYF SYLQLRTASV SEIQNKMKSV VYCTDDVDKT TVTTFQALQN
      181 LVQRGKCVSY TVKSVPVLQR CFPEAIFNAV DNVNNVLNSS NSLDYLKRTF GDDALIPQDI
      241 QITGQSSEVM KSVVEDQPVT HKVIHDLSQT WWQTLILIFA AGILSFIWTV IMRLLGSLII
      301 WLSILIVLVA LGFGAGFSWL KWNTLKTTGA IDDYSFHPAF DAYFEMPTTW LVVAIATSVL
      361 LLIFLLVILF IRQRISIACA LISESSKAIG SMMSTLLFPL FPFLLHIGVF ALWGSIAIWL
      421 ASSGQEVCRL KETNGQVYNT STKCDCTAKV TGCTYVGIEK ESETIFWLQV YNLFAFFWLS
      481 CFVTALGDIA LAGAFASYYW ARDKRHDVPT FPVIRALNRA IRYNLGSIAF GSLIIAIVKI
      541 IRVLLEYIDH KLGKSQNKAV KWFLMCLKCC FWCLEVFFKF LTKNAYIMIA IYGKNFFSSA
      601 KDSFLLITRN IVRTVVVHKV AGILLFLGKS MITLGMGILS FYYFSGRWVV EGVPKVDLYY
      661 YFVPIVIVVI GSYFMADLFF DVYEMAVDTT FICFLEDSEQ NDGSLERPFF MSEKLLEILG
      721 NKNDIPLHSK
//