LOCUS       CCD62786.1               771 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Choline transporter-like protein 1 protein.
ACCESSION   BX284606-1206
PROTEIN_ID  CCD62786.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="chtl-1"
                     /locus_tag="CELE_F35C8.7"
                     /standard_name="F35C8.7a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="WormBase:WBGene00018037"
     intron_pos      87:2 (1/9)
     intron_pos      143:2 (2/9)
     intron_pos      238:1 (3/9)
     intron_pos      289:2 (4/9)
     intron_pos      428:2 (5/9)
     intron_pos      630:0 (6/9)
     intron_pos      678:1 (7/9)
     intron_pos      712:1 (8/9)
     intron_pos      736:1 (9/9)
BEGIN
        1 MGRKKHRTIP AVEVYEKSDG FPMPTAPPMS PSRMDGVYPS HHVPPLHQAY HVQPASANHV
       61 PDQIARFNVI KPDRLAKRHN PQLYTKRGCT DVFCCFLFFV FLCGWVVVAG FGIMWGDPQR
      121 LIYPTDSEFR RCGVNLEGSY NFSKRPYLFY FDLTKCISYA TALGGCQTTQ LCVKECPSTY
      181 FSYLQLRTAS VSEIQNKMKS VVYCTDDVDK TTVTTFQALQ NLVQRGKCVS YTVKSVPVLQ
      241 RCFPEAIFNA VDNVNNVLNS SNSLDYLKRT FGDDALIPQD IQITGQSSEV MKSVVEDQPV
      301 THKVIHDLSQ TWWQTLILIF AAGILSFIWT VIMRLLGSLI IWLSILIVLV ALGFGAGFSW
      361 LKWNTLKTTG AIDDYSFHPA FDAYFEMPTT WLVVAIATSV LLLIFLLVIL FIRQRISIAC
      421 ALISESSKAI GSMMSTLLFP LFPFLLHIGV FALWGSIAIW LASSGQEVCR LKETNGQVYN
      481 TSTKCDCTAK VTGCTYVGIE KESETIFWLQ VYNLFAFFWL SCFVTALGDI ALAGAFASYY
      541 WARDKRHDVP TFPVIRALNR AIRYNLGSIA FGSLIIAIVK IIRVLLEYID HKLGKSQNKA
      601 VKWFLMCLKC CFWCLEVFFK FLTKNAYIMI AIYGKNFFSS AKDSFLLITR NIVRTVVVHK
      661 VAGILLFLGK SMITLGMGIL SFYYFSGRWV VEGVPKVDLY YYFVPIVIVV IGSYFMADLF
      721 FDVYEMAVDT TFICFLEDSE QNDGSLERPF FMSEKLLEIL GNKNDIPLHS K
//