LOCUS       CCD62755.2               916 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans EB domain-containing protein protein.
ACCESSION   BX284606-1445
PROTEIN_ID  CCD62755.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="chtb-3"
                     /locus_tag="CELE_T10E10.4"
                     /standard_name="T10E10.4a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00020421"
                     /db_xref="EnsemblGenomes-Tr:T10E10.4"
                     /db_xref="GOA:Q22378"
                     /db_xref="InterPro:IPR006150"
                     /db_xref="InterPro:IPR036508"
                     /db_xref="UniProtKB/TrEMBL:Q22378"
                     /db_xref="WormBase:WBGene00020421"
     intron_pos      22:1 (1/14)
     intron_pos      98:2 (2/14)
     intron_pos      118:1 (3/14)
     intron_pos      215:0 (4/14)
     intron_pos      236:1 (5/14)
     intron_pos      255:1 (6/14)
     intron_pos      280:1 (7/14)
     intron_pos      363:0 (8/14)
     intron_pos      581:0 (9/14)
     intron_pos      617:1 (10/14)
     intron_pos      654:1 (11/14)
     intron_pos      790:1 (12/14)
     intron_pos      826:2 (13/14)
     intron_pos      875:1 (14/14)
BEGIN
        1 MELYISMLPF LTILLLPHPS QGIENSPSAG KVCMTVEHLR PADNSTQFYE CAPLNEDEVK
       61 GYALSKKYLG VWNLRDCPKE HEFDEPKQRC IEKKTFRRQQ VACAQNVQAS GCVSACQAPT
      121 AVANQGMECN WRSSPLQQDP ASNAYFFQCV PSSPTEGCGE WTRMQCSQST VFNSDLNVCV
      181 PLAIQNSCDS STQQPVCSCS QVSSSCPGTS QCQNKVCCQQ TDTLNLNNLI QHQAPLCPGS
      241 NVPPLGSCNE QCPQYSACTP GLGCCPVPVN EQPTGMIKIT LCPGSYSPPF GVCGSCPSGT
      301 QCNQQLQMCC PLQQQPSTDI VYNVVLLCPD GTPSTTSCSK GCGPNNACFQ GACCPIRCPV
      361 GQNAVGFCSS GSCGVGSCYS KTTCCQEPIK LPVCSNGMIS QKRCLVAAEC GLNLECSNGG
      421 CCPIPFCPNG VTARGRCSQV NGCPMGQACM EGLCCPLPKC SNGITSLGIC TRTLDCGRIG
      481 VDCNNGACCP LPTCPNNIAS SQRCSGGCTN CCPVGQTCMN GGCCDLPSCP SGGFAISMCT
      541 GKCGTGFECV NSGCCSLPRC PSGLMSVQRC AMGIGCPPGN QCENGVCCPM PMCSSGSIAS
      601 SVCGMANSCP IGYICEGRGC CLEPLPLCPN GGRASMRCYR GAECPPGYGC TPLGGCCLLS
      661 MEPVCPTRSN AVCQCSPNNV CPSGASCTMG TCCSSGISPI VSFSVPGTSC QNSNQCNGFQ
      721 STCAQCVQEV CSCVNGAASN GATCEQMAPT VLTLARNGCD QYGSPCKFLL STARRRPLFA
      781 PIGNMTETPL FFNVASKRKC VANIQNFDAD STCLPNEKCI DGECRMKLWP GEYGCQTDIE
      841 CQSRCPNTYC EKKKSDKNVP QCQCTNGMLL YGRCFSQCPR GFHESGAFCM HDDEDKFWMD
      901 AESQDNLKAL LNAGKC
//