LOCUS CCD62749.1 655 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Uncharacterized protein protein.
ACCESSION BX284606-1454
PROTEIN_ID CCD62749.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="C03B1.7"
/locus_tag="CELE_C03B1.7"
/standard_name="C03B1.7b"
/note="Confirmed by transcript evidence"
/db_xref="WormBase:WBGene00015378"
intron_pos 36:0 (1/8)
intron_pos 175:0 (2/8)
intron_pos 300:0 (3/8)
intron_pos 320:0 (4/8)
intron_pos 413:0 (5/8)
intron_pos 553:1 (6/8)
intron_pos 583:1 (7/8)
intron_pos 602:0 (8/8)
BEGIN
1 MDRNISGVSV KDYETLKNFE DKSPPQAENA SSSKKDEPIS VECTDETSSR LSPATDISHE
61 MAEHGTPDSG MISDVSEIKV LPAGKIEKKL IKELNPEMMV GRDGRRYRQK LREAEKQATV
121 EFKLENFEQT NGEAQSVEND ILTGKEKRRL KDKLRKEKKE QSKLFVEKDL EKNKESSSAS
181 LSTNKLAESP TEADKNSNVI HTNIKPKDIC IETEYPANND NKKKSEVMFS STVTNVFGRN
241 ENQTSFDVKE HTVDSFELLP GEYRISNFGQ QMADTTSAEM TALGKMPQEA GEVKPTVREH
301 SGANFLQRER NFPLSLKTTV IANSPEGDIE GKRLSKGQKR RARNKANKGV YVVNENGSHS
361 IELLPGEYKL LELDENKKIQ EFPIDTRHYM RDDQTGGGSK IVEQGQRTKK KKNFYVAGNL
421 SKNILDNGKW LAYVIDDKNS DGVPRVGEVS TEEVQETIKL LDSKISHNAI QDNSCSEDFE
481 FGSSSSTNFV TGSSRSLLPE LDADFVRKTL ADYEENATED AAENNNEVFE SASEELEMFM
541 NSEGIAPNFH SEFAKKTSPL LVGNAEFKDF CSKYSNSKYD NKTISKLVKK YIDTRIVHHY
601 ERFKKLADRE SHRIAKSWTK IYETSSYSLM VMLYTNSPSS SVGFSDLEEI LFNDR
//