LOCUS       CCD62725.2               461 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans Inward rectifier potassium channel
            irk-1 protein.
ACCESSION   BX284606-147
PROTEIN_ID  CCD62725.2
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="irk-2"
                     /locus_tag="CELE_M02A10.2"
                     /standard_name="M02A10.2b"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00002150"
                     /db_xref="EnsemblGenomes-Tr:M02A10.2b"
                     /db_xref="GOA:D3YT08"
                     /db_xref="InterPro:IPR013518"
                     /db_xref="InterPro:IPR014756"
                     /db_xref="InterPro:IPR016449"
                     /db_xref="InterPro:IPR040445"
                     /db_xref="InterPro:IPR041647"
                     /db_xref="UniProtKB/TrEMBL:D3YT08"
                     /db_xref="WormBase:WBGene00002150"
     intron_pos      37:0 (1/14)
     intron_pos      55:2 (2/14)
     intron_pos      101:0 (3/14)
     intron_pos      135:2 (4/14)
     intron_pos      160:0 (5/14)
     intron_pos      187:0 (6/14)
     intron_pos      218:0 (7/14)
     intron_pos      240:2 (8/14)
     intron_pos      283:1 (9/14)
     intron_pos      312:2 (10/14)
     intron_pos      354:0 (11/14)
     intron_pos      393:0 (12/14)
     intron_pos      414:0 (13/14)
     intron_pos      451:1 (14/14)
BEGIN
        1 MLDIEEPLVK NKKYPFFKTP RLGGSRRIRN RLVQKQGLCN ISLKNVPKQR RKYFSDIFTT
       61 VIEMKWRWCL LYFSLSFMIS WSFFATVYFL IAKQHGDIEQ IANATWTPCI VNVHNELNAF
      121 LFSFTTQTTI GYGFRYPTDA CPLTIVTMCF QFMWGVMTQT LMAGIIFSKL ARPIKRAATL
      181 IFSKNAVICL RDGKLCLLFR VGDMRKSSLA EAHVRLQMIK RCVTYEGELL PFHQFDMDVG
      241 YDQGLDRVFV IWPITICHEI DERSPLWEIG ADDLKSAKFE IIAILEGVVE SVGSTTQART
      301 SYLPSEILWG HRFEKLVHYK KENGQYNIDF GKFHNVYSVN TPTCSAAEIE RLRSEGIFNE
      361 SEYQMYPPSD NKLNLLDNDE MSPVRDSIDL NQIQILRRDS DEDPDAGEES MELVDLGIHH
      421 KCSIRSQSPI INSTSHLLQP MHKNSCSVRR GSSTLNVSLH G
//