LOCUS       CCD62721.1               582 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans E3 ubiquitin-protein ligase CBL protein.
ACCESSION   BX284606-152
PROTEIN_ID  CCD62721.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="sli-1"
                     /locus_tag="CELE_M02A10.3"
                     /standard_name="M02A10.3a"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Tr:M02A10.3a"
                     /db_xref="GOA:Q19019"
                     /db_xref="InterPro:IPR001841"
                     /db_xref="InterPro:IPR003153"
                     /db_xref="InterPro:IPR011992"
                     /db_xref="InterPro:IPR013083"
                     /db_xref="InterPro:IPR014741"
                     /db_xref="InterPro:IPR014742"
                     /db_xref="InterPro:IPR017907"
                     /db_xref="InterPro:IPR024159"
                     /db_xref="InterPro:IPR024162"
                     /db_xref="InterPro:IPR036537"
                     /db_xref="InterPro:IPR036860"
                     /db_xref="UniProtKB/TrEMBL:Q19019"
                     /db_xref="WormBase:WBGene00004829"
     intron_pos      23:0 (1/10)
     intron_pos      48:0 (2/10)
     intron_pos      65:0 (3/10)
     intron_pos      108:0 (4/10)
     intron_pos      205:2 (5/10)
     intron_pos      255:2 (6/10)
     intron_pos      345:2 (7/10)
     intron_pos      419:0 (8/10)
     intron_pos      477:0 (9/10)
     intron_pos      519:0 (10/10)
BEGIN
        1 MGSINTIFHR IHRFVNGTGN NARFVPSTNN STEALTLSPR AVPSTVSLFE IPSASEMPGF
       61 CSEEDRRFLL KACKFMDQVV KSCHSPRLNL KNSPPFILDI LPDTYTHLML IFTQNNDILQ
      121 DNDYLKIFLE SMINKCKEII KLFKTSAIYN DQSEERRKLT KMSLTFSHML FEIKALFPEG
      181 IYIEDRFRMT KKEAESFWSH HFTKKNIVPW STFFTALEKH HGSTIGKMEA AELKATIDLS
      241 GDDFISNFEF DVFTRLFYPF KTLIKNWQTL TTAHPGYCAF LTYDEVKKRL EKLTKKPGSY
      301 IFRLSCTRPG QWAIGYVAPD GKIYQTIPQN KSLIQALHEG HKEGFYIYPN GRDQDINLSK
      361 LMDVPQADRV QVTSEQYELY CEMGTTFELC KICDDNEKNI KIEPCGHLLC AKCLANWQDS
      421 DGGGNTCPFC RYEIKGTNRV IIDRFKPTPV EIEKAKNVAA AEKKLISLVP DVPPRTYVSQ
      481 CSQSLLHDAS NSIPSVDELP LVPPPLPPKA LGTLDTLNSS QTSSSYVNIK ELENVETSGE
      541 ALAQVVNRQR APSIQAPPLP PRLSASEHQP HHPYTNTNSE RE
//