LOCUS CCD62665.1 899 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans C2 domain-containing protein protein. ACCESSION BX284606-787 PROTEIN_ID CCD62665.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="tmem-24" /locus_tag="CELE_R11G1.6" /standard_name="R11G1.6a" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00020012" /db_xref="EnsemblGenomes-Tr:R11G1.6a" /db_xref="GOA:Q8MPZ6" /db_xref="InterPro:IPR000008" /db_xref="InterPro:IPR002219" /db_xref="InterPro:IPR035892" /db_xref="InterPro:IPR039934" /db_xref="UniProtKB/TrEMBL:Q8MPZ6" /db_xref="WormBase:WBGene00020012" intron_pos 83:1 (1/14) intron_pos 131:2 (2/14) intron_pos 183:0 (3/14) intron_pos 218:0 (4/14) intron_pos 258:0 (5/14) intron_pos 342:0 (6/14) intron_pos 392:0 (7/14) intron_pos 454:2 (8/14) intron_pos 567:1 (9/14) intron_pos 714:2 (10/14) intron_pos 785:2 (11/14) intron_pos 824:2 (12/14) intron_pos 848:1 (13/14) intron_pos 875:2 (14/14) BEGIN 1 MLSGERFESL LKSPKHHAKQ FQEKVLNAYN YAIQLYTDAI ESETFATYGQ LILPLAVLVS 61 VVLTILLCSV IWKILYYTSF LQVLGWLFGE MLWVILSWGL VAVLCYFALN HLGSTGEAAH 121 TSSTFGSSVS GNGVANGGTH TSSGEWSNEI VSWLYSNFHK VPAPMDAWIK SLNEAAKKVT 181 SPTKCEVLFE GFGDHSDVLQ PPKISNVRVE HGPRDHLTVR SNVHLPCVKL RLVSSQRTPE 241 RMIVSNYDVS IVDLRGEVEC RMACIANQLY LMGCFSGRPE MDIELRNTDP NAQYQVSIPM 301 VEESIRRCLL SAVTNINLSE EMPEERNTFA DTFSRTIYNP PTHSPSGTMR NSYNNYDTNL 361 HVDAYGTQSS HRSNSPSGDV PEMFKKLNES HLISPSYNTN SIPNKMRIKV IKASRLGREV 421 SQPFVNVEMD EPAQKYSTTK GINANPFWEE TFDFDLTPAT EEILFEIYEG NDKLHMNDDE 481 GFLGLAIVNF EEIRRSGETV HSLKLQGRPY RKDAISGEIT VQFDFFYDPN LLTSGKLTDT 541 VKVTNPNGSE FRETLTTHRR PIYDPHDNFD GHEPIVPSKT TTVTVKTVSQ TLKEKPTIQS 601 VHGSLENAVD PATQKILDRQ FKNHNDPKTR ELEAKLQSVA QSMSASSTLD RPSKNGNNGQ 661 YYRDQTAPPE FHEELDVRQS RDKSKKAPTE KRDRSFFGEL KDRLSGRRGR SQKRSKSVDV 721 ENNQLLEEAV SLPPSRDPSR TRYAVSSNDK YRETHSVGGR SGESTKSLYQ HSTLILELDQ 781 DKQAKYFLIP PAMLNEPAAS RLMRKGKKLH IYNDHTFVAV KVKGGATCNV CQQRIRSSFS 841 KQAYQCRDCK MVCHKTCHYK TDAFCTQSNV SKLQIAKDVD WAHFLSHYQL EEFISSEGL //