LOCUS CCD61860.1 634 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Catechol-O-MethylTransferase family protein. ACCESSION BX284606-610 PROTEIN_ID CCD61860.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="comt-1" /locus_tag="CELE_F53B3.2" /standard_name="F53B3.2" /note="Product from WormBase gene class comt" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00018741" /db_xref="EnsemblGenomes-Tr:F53B3.2" /db_xref="GOA:Q20710" /db_xref="InterPro:IPR002935" /db_xref="InterPro:IPR029063" /db_xref="UniProtKB/TrEMBL:Q20710" /db_xref="WormBase:WBGene00018741" intron_pos 26:0 (1/10) intron_pos 59:1 (2/10) intron_pos 189:1 (3/10) intron_pos 290:2 (4/10) intron_pos 368:0 (5/10) intron_pos 395:1 (6/10) intron_pos 434:0 (7/10) intron_pos 475:1 (8/10) intron_pos 584:0 (9/10) intron_pos 617:0 (10/10) BEGIN 1 MRLVIPFALI LTSVGFADGF IWLPFANLGS MFETLKQTAF HEKLDFNEPD SQYSFLEFGK 61 DLFNNIGQYL SSAIGNEDKL TIATNLRELF NLTTSTPLPK TPKRFRPKII PVDKPETTSK 121 PTPRPMPTVF TFPYTTPHFT TSTPVPEVTS TYDPRPRFRY TTTTEPQIIK FVKTTKPTTT 181 TEDTTTEDDI IRFTTTTERV RYATFSPNIP MTTSTTPTTT TSTFPTSTTE KSTTAQPSTT 241 TKPTTTSPPT TQVKTILPAT EAQKIFTKPQ YQIWPTTTRP MTSTSQAVIS STEQFIRPSS 301 IIRNNVWKKV TPSVTPEYTT SVFWTTPMSV TAELPSEPST ITMLIPTPPS EYQTVYSSTA 361 GIPFIIKAKK FTRPPIVEKI AVTSAPHTNK YDTCVPDQRC SIKLKSFETS DPLFQYCYSH 421 STMIDNSIQD LLRDTQTASS LPQHISWHSS VTPEIVQLVQ TLMSLYRPSR CLVIGVFTGL 481 GLLGVAERVD SRGIVVALEH PAYAVFWDKI GQKHARKLTA TQMSRIQMRT SESIEKSLPR 541 LATNEPNTFD FVFLDDFKRE NYLDDYEHAI RLIRSGGLLI INQALNGGGV MSSIDHMTND 601 DRVIRNMNIR IKQDPRVSAS LLPYGGGTWI VTKN //