LOCUS       CCD61758.1               760 aa    PRT              CON 06-FEB-2024
DEFINITION  Caenorhabditis elegans WD_REPEATS_REGION domain-containing
            protein protein.
ACCESSION   BX284606-97
PROTEIN_ID  CCD61758.1
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 17718942)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  JOURNAL   Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
            Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
            help@wormbase.org
REFERENCE   2  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  JOURNAL   Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
            Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
            Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE   3  (bases 1 to 17718942)
  AUTHORS   Sulson J.E., Waterston R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282(5396), 2012-2018(1998).
COMMENT     Annotated features correspond to WormBase release WS292.
            Protein-coding gene structures below are the result of integration
            and manual review of the following types of data: ab initio
            predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
            alignments to published proteins and cDNAs; genome sequence
            conservation with other nematodes (e.g. to C. briggsae using WABA:
            Genome Res. 2000. 10:1115-1125); sequence features (such as
            trans-splice and polyA sites).
            Sources of data: large-scale EST projects of Yuji Kohara
            (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
            cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
            sequencing project (Genome Res. 2009. 19:2334-2342); IST library
            (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
            Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
            Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
            sequencing data (454 read clusters - Makedonka Mitreva,
            unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
            Numerous data sets from the modENCODE project (Science. 2010.
            330:1775-87); Individual C. elegans Nucleotide Database
            submissions; Personal communications with C. elegans researchers;
            Non-Coding gene structures below are derived using the following
            methods and data: ab initio prediction of tRNAs by tRNAscan-SE
            (Nucl. Acids. Res., 25, 955-964); integration and appraisal of
            miRNAs from miRBase (http://www.mirbase.org); integration and
            appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
            2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
            manual curation of novel published ncRNAs from the literature.
FEATURES             Qualifiers
     source          /organism="Caenorhabditis elegans"
                     /chromosome="X"
                     /strain="Bristol N2"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:6239"
     protein         /transl_table=1
                     /gene="che-2"
                     /locus_tag="CELE_F38G1.1"
                     /standard_name="F38G1.1"
                     /note="Confirmed by transcript evidence"
                     /db_xref="EnsemblGenomes-Gn:WBGene00000484"
                     /db_xref="EnsemblGenomes-Tr:F38G1.1.1"
                     /db_xref="EnsemblGenomes-Tr:F38G1.1.2"
                     /db_xref="GOA:G5EGF0"
                     /db_xref="InterPro:IPR001680"
                     /db_xref="InterPro:IPR015943"
                     /db_xref="InterPro:IPR017986"
                     /db_xref="InterPro:IPR036322"
                     /db_xref="UniProtKB/TrEMBL:G5EGF0"
                     /db_xref="WormBase:WBGene00000484"
     intron_pos      55:2 (1/13)
     intron_pos      85:1 (2/13)
     intron_pos      122:1 (3/13)
     intron_pos      212:0 (4/13)
     intron_pos      258:0 (5/13)
     intron_pos      299:2 (6/13)
     intron_pos      358:2 (7/13)
     intron_pos      383:2 (8/13)
     intron_pos      459:0 (9/13)
     intron_pos      528:1 (10/13)
     intron_pos      611:0 (11/13)
     intron_pos      698:2 (12/13)
     intron_pos      740:0 (13/13)
BEGIN
        1 MKLKLSASRK TRHTEMVCGV GWIGTEAILS AADDHVFLLT NTATNESQQI LNMPETFFPT
       61 SLHIFPRSQT KGGQNDVFAV STSDGKINIL SRNGKVENMV DAHNGAALCA RWNSDGTGLL
      121 SSGEDGFVKM WSRSGMLRSV LAQFATAVYC VAWDSTSSNV LYCNADHCYI KSLKMQVAPI
      181 KWKAHDGIIL CCDWNPTSDL IVTGGEDLKF KVWDGFGQIL FNSSVHDYPI TSISWNTDGT
      241 LFAVGSHNIL RLCDKSGWSH SLEKMNAGSV MALSWSPDGT QLAVGTAAGL VFHAHIIDKR
      301 LTYEEFEIVQ TQKTVIEVRD VSSEVSRETL ETKERISKIA ILYKYLIVVT SSHIYIYSSK
      361 NWNTPTMIEY NERTVNIIVQ CEKIFLVSDG MTITIFTYEG RKLINLNPPG QVMALLDERK
      421 IDLANDTLVV RDRADNKVLH FFDPTTGKAQ GDGNLKHEHD IVELTVNQCG PLNDRNVAFR
      481 DQIGAVHIAM VKTFGVSQRM VKIGSLVEQL VFNDVTNMLC GISEGKIAVW PLPNVAFHDR
      541 NLLQKSLIQK NIGSVGKFPQ LANFAGNTIV IRKSDGCLLP TGILPFYGTL ITMASQSKWD
      601 QAIRLCRSIG NDTMWATFAG LAVLHKNMIV MEIAYAALED DEKVSLINEI KDKTDKETRQ
      661 AMQVVLTGKL ADADVLLERS GLSFRSLMLN IQMFKWKRAL ELGLKNKQWL EIVMGYREKY
      721 LKNCGQKETD PLFLKHMSEV EIDWVHIREL IAAEKAKGNN
//