LOCUS CCD61758.1 760 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans WD_REPEATS_REGION domain-containing protein protein. ACCESSION BX284606-97 PROTEIN_ID CCD61758.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 17718942) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 17718942) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="X" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="che-2" /locus_tag="CELE_F38G1.1" /standard_name="F38G1.1" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00000484" /db_xref="EnsemblGenomes-Tr:F38G1.1.1" /db_xref="EnsemblGenomes-Tr:F38G1.1.2" /db_xref="GOA:G5EGF0" /db_xref="InterPro:IPR001680" /db_xref="InterPro:IPR015943" /db_xref="InterPro:IPR017986" /db_xref="InterPro:IPR036322" /db_xref="UniProtKB/TrEMBL:G5EGF0" /db_xref="WormBase:WBGene00000484" intron_pos 55:2 (1/13) intron_pos 85:1 (2/13) intron_pos 122:1 (3/13) intron_pos 212:0 (4/13) intron_pos 258:0 (5/13) intron_pos 299:2 (6/13) intron_pos 358:2 (7/13) intron_pos 383:2 (8/13) intron_pos 459:0 (9/13) intron_pos 528:1 (10/13) intron_pos 611:0 (11/13) intron_pos 698:2 (12/13) intron_pos 740:0 (13/13) BEGIN 1 MKLKLSASRK TRHTEMVCGV GWIGTEAILS AADDHVFLLT NTATNESQQI LNMPETFFPT 61 SLHIFPRSQT KGGQNDVFAV STSDGKINIL SRNGKVENMV DAHNGAALCA RWNSDGTGLL 121 SSGEDGFVKM WSRSGMLRSV LAQFATAVYC VAWDSTSSNV LYCNADHCYI KSLKMQVAPI 181 KWKAHDGIIL CCDWNPTSDL IVTGGEDLKF KVWDGFGQIL FNSSVHDYPI TSISWNTDGT 241 LFAVGSHNIL RLCDKSGWSH SLEKMNAGSV MALSWSPDGT QLAVGTAAGL VFHAHIIDKR 301 LTYEEFEIVQ TQKTVIEVRD VSSEVSRETL ETKERISKIA ILYKYLIVVT SSHIYIYSSK 361 NWNTPTMIEY NERTVNIIVQ CEKIFLVSDG MTITIFTYEG RKLINLNPPG QVMALLDERK 421 IDLANDTLVV RDRADNKVLH FFDPTTGKAQ GDGNLKHEHD IVELTVNQCG PLNDRNVAFR 481 DQIGAVHIAM VKTFGVSQRM VKIGSLVEQL VFNDVTNMLC GISEGKIAVW PLPNVAFHDR 541 NLLQKSLIQK NIGSVGKFPQ LANFAGNTIV IRKSDGCLLP TGILPFYGTL ITMASQSKWD 601 QAIRLCRSIG NDTMWATFAG LAVLHKNMIV MEIAYAALED DEKVSLINEI KDKTDKETRQ 661 AMQVVLTGKL ADADVLLERS GLSFRSLMLN IQMFKWKRAL ELGLKNKQWL EIVMGYREKY 721 LKNCGQKETD PLFLKHMSEV EIDWVHIREL IAAEKAKGNN //