LOCUS CCD61475.1 895 aa PRT CON 06-FEB-2024 DEFINITION Caenorhabditis elegans Putative endoplasmic reticulum metallopeptidase 1-A protein. ACCESSION BX284602-2764 PROTEIN_ID CCD61475.1 SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 15279421) AUTHORS WormBase. CONSRTM WormBase Consortium JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 2 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA. REFERENCE 3 (bases 1 to 15279421) AUTHORS Sulson J.E., Waterston R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282(5396), 2012-2018(1998). COMMENT Annotated features correspond to WormBase release WS292. Protein-coding gene structures below are the result of integration and manual review of the following types of data: ab initio predictions by Genefinder (P. Green and L. Hillier, pers. comm.); alignments to published proteins and cDNAs; genome sequence conservation with other nematodes (e.g. to C. briggsae using WABA: Genome Res. 2000. 10:1115-1125); sequence features (such as trans-splice and polyA sites). Sources of data: large-scale EST projects of Yuji Kohara (http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome cloning project (http://worfdb.dfci.harvard.edu); RST large-scale sequencing project (Genome Res. 2009. 19:2334-2342); IST library (Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010 Unpublished); UTRome EST data submission (UTRome v1 Mangone M. Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep sequencing data (454 read clusters - Makedonka Mitreva, unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66); Numerous data sets from the modENCODE project (Science. 2010. 330:1775-87); Individual C. elegans Nucleotide Database submissions; Personal communications with C. elegans researchers; Non-Coding gene structures below are derived using the following methods and data: ab initio prediction of tRNAs by tRNAscan-SE (Nucl. Acids. Res., 25, 955-964); integration and appraisal of miRNAs from miRBase (http://www.mirbase.org); integration and appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell. 2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87); manual curation of novel published ncRNAs from the literature. FEATURES Qualifiers source /organism="Caenorhabditis elegans" /chromosome="II" /strain="Bristol N2" /mol_type="genomic DNA" /db_xref="taxon:6239" protein /transl_table=1 /gene="B0495.7" /locus_tag="CELE_B0495.7" /standard_name="B0495.7" /note="Confirmed by transcript evidence" /db_xref="EnsemblGenomes-Gn:WBGene00015206" /db_xref="EnsemblGenomes-Tr:B0495.7.1" /db_xref="EnsemblGenomes-Tr:B0495.7.2" /db_xref="WormBase:WBGene00015206" intron_pos 33:0 (1/6) intron_pos 100:0 (2/6) intron_pos 578:2 (3/6) intron_pos 763:0 (4/6) intron_pos 824:0 (5/6) intron_pos 878:2 (6/6) BEGIN 1 MLRRRGGPNE LRDELNNSKN QPEDDQRTKR GRESIGFRHW IYFVLTVAIV YAGVVALHRK 61 MPAVRDGTSF EDFSEQRARV LLKQLTALGS RPSGSDNLEV KAFGMIQDRI GKIHSVVDEV 121 GVNRLESDVQ RPSGCFDLKF LSSFTLCYHK ITNVVVRIGP KKGPSGNSLL LNCHFDTMPD 181 TPGATDDAVA CTIMMDVLEV LAHSKTELEN DVVFLFNGAE ENFLQAAHGF INQHPWRHDI 241 RAFINLEGTG SGGREILFQA GPGNSWLLQT YLENAPHPFC SVLAQEIFQS GIIPSDTDFR 301 IFRDYGRISG LDIAYTKNGW FYHTEFDEEW RIEPGAIQRA GENVLAVVRA ILKSPYLEKP 361 ATFDEENRWV FYDVVGLFTV YYSVNVGKLL NYIACFATYF LVVLRIRNRL YSVGDLAIAF 421 KHHVVAFLAM VITMLLIIAF VVQMDLVMCW YKMPEIVGAL YVLPMLIAGA IVHSHYADNN 481 RIRNVEMVQY DTILLSFASI LFLMTFYNLS SAFYVLNNLI LPVFKDIIIW ALGLFGVIRR 541 VTPRVLFFTQ LFCFLPTFVF AAYAISQCVD FFVPVMGRLG NAINPEFIMG PLGLVIASGF 601 ILFVNNLFYI SRRMNYIIRL LFAIFALFIL VLITTKVGNP YEYSHENPRL RRIIALHANR 661 TIYDFEGHLT QKDNALFVHS LDYRGASDLP DHSFLQGSSA PNCTGVVDEY CRMPYYTAIH 721 ELFPPEQSLW VPVPSPVVLP YPIDLKLVSR HAMGENLNLT FEIRGGYDKM SLHVTPLNDY 781 DLLSWSFTDI DIKEFGRRQT YFVFMTYGHE APEVRRFWIL LKNKNGVAPD PEKHENIELS 841 VATHYAHGIY QDTETLRQLR AMISSRRQTP EQAVGWWRWG ITMVGGRSEI VVKIF //