LOCUS CCD61190.1 2098 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Unconventional myosin heavy chain 6 protein.
ACCESSION BX284606-481
PROTEIN_ID CCD61190.1
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="hum-6"
/locus_tag="CELE_T10H10.1"
/standard_name="T10H10.1"
/note="Confirmed by transcript evidence"
/db_xref="EnsemblGenomes-Gn:WBGene00002039"
/db_xref="EnsemblGenomes-Tr:T10H10.1"
/db_xref="WormBase:WBGene00002039"
intron_pos 7:0 (1/26)
intron_pos 44:0 (2/26)
intron_pos 93:0 (3/26)
intron_pos 154:2 (4/26)
intron_pos 226:1 (5/26)
intron_pos 281:0 (6/26)
intron_pos 417:2 (7/26)
intron_pos 473:0 (8/26)
intron_pos 813:0 (9/26)
intron_pos 854:0 (10/26)
intron_pos 888:0 (11/26)
intron_pos 979:0 (12/26)
intron_pos 1080:2 (13/26)
intron_pos 1224:0 (14/26)
intron_pos 1273:2 (15/26)
intron_pos 1300:0 (16/26)
intron_pos 1357:0 (17/26)
intron_pos 1437:2 (18/26)
intron_pos 1494:1 (19/26)
intron_pos 1557:0 (20/26)
intron_pos 1597:2 (21/26)
intron_pos 1640:2 (22/26)
intron_pos 1755:2 (23/26)
intron_pos 1782:0 (24/26)
intron_pos 2030:0 (25/26)
intron_pos 2068:0 (26/26)
BEGIN
1 MVLVSKGDFI WIEPGKTEGS IPIGARVIDQ DHGRLKVIDD LGNEQWLSAD RRVRLMHPTS
61 VQGVEDMCQL GDFHESAILR NLFIRYREKL IYAYTGSILI AVNPYMDIAI YTADEIRMYK
121 RKRIGELPPH IFAIADNAYT NMRREKKNQS VIISGESGAG KTESTKLVLQ FLATISGQHS
181 WIEQQVLEAN PVLEAFGNAK TIRNDNSSRF GKYIDVHFNE SGSIEGAKIE QYLLEKSRIV
241 TQSENERNYH IFYCLLAGLS REEKSELELG TAADYYYLIQ GKTLTAEGRD DAADLAEIRS
301 AMRVLMINEQ EIGSIFKLLA SLLHIGNIRF RQNTNDNMES VDVADPSTLV RIAKLLQLHE
361 QNLLDAITTK SLVTREERVI SRLNGQQAVD ARDALAKAIY GKLFIHIVRR VNDAIYKPSQ
421 SRRTSIGILD IFGFENFESN SFEQLCINFA NETLQQFFVH HVFKMEQKEY DEEHINWRHI
481 KFVDNQATVD LIAQRPLNIL SLIDEESIFP KGTDKTMLLK LHSTHGRNEL YLQPKSELQR
541 AFGVTHFAGN VFYNTRGFLE KNRDSFSADL SVLISSSKMP FLARLFDDIE YDTSSRKKVT
601 VGNQFRRSLE QLMSQLTQTH PFFIRCIKPN EMKRALVMDR DLVLRQLRYS GMMETIKIRR
661 SGYPIRHDYY PFVFRYRVLV SSIQGPVNRI DLHDAAKKIC HMILGTNADY QLGKTKVFLK
721 DKHDLVLEQE YYRILKDKAI VIQKNVRRWL VRKDFEKQRQ AAVTIQTAWR GFDQRKRYRQ
781 IISGFSRLQA VLRSRQLVSH YQTLRKTIIQ FQAVCRGSLV RRQVGEKRKR GEKAPLTEVS
841 STASVISDSH EELVGHLFDF LPSDGKDSGN ENDSADSSRR GSYSRLHTSP VMPPANIPRV
901 DSYVDEDLSK YQFGKYAATF FQAQATATHV KKPLKTALLT HTEPSAQLAA LTAWTTILRF
961 MGDLADVKPG STNGSEVYDK TPVMIKLYAT LGKKFSAHDL EEAMLSSEYG GAKTLKKGMG
1021 RKLISMTLKR KGKINGSDTS SISSDSVYSS FNAMLENKPM TSLDKLHYII GLGILREDLR
1081 DEIYCQLCKQ LSNNPSKLSA ARGWILLSLC VGCFAPSERF IKYLFCFIRE RGPAGTGYSK
1141 YIEDRLRRTQ VNGTRHQPPS YVELQANKSQ KPVVLAVTFM DGSVKTLCAD SATTAAELCK
1201 QLAEKVGLTN SFGFSLYIAL FDKVSSLGSG TDHVMDAISQ CEQYAKEQGR QERNAPWRLF
1261 FRKEIFSPWH DPRDDPVSTN LIYQQVIRGI KYGEYRCDKD EELAAICAQQ YYIDEGTMDV
1321 NKLENNLPSY LPDFEMSGKE MALEKWTQTI MHQYRKKFTG RLPSQIEVKE NVVSVAKTKW
1381 PLLFSRFYEA LKFAGPPLPK NEVIIAVNWT GVYVVDDREH VMLEFSFPEI STAYYGKGKR
1441 STTDTCTVRT VVGDEYTFQS PNADDITNLI VMFLEGLKKR SRYLVAIKSQ KGDEKNNFLE
1501 FEKGDLLILV NEFTGNTLLT ESVVKGENSR TCLFGLIRAE NVYVLPTLVK PSKNTLQIFP
1561 KDMDLSLDLF NNNKQVTVVD YNAEPYTLEN FAEDNFNSQV KRVGSQISLM TLRKKESQIE
1621 CWRFSREHID QPLLKKLNGR EDACRGAIEI FAAIMKYMGD EPSKRSRLGT HLTDHIFKLP
1681 ISMEALRDEL YCQLVKQLTL NPSIMSEERG WELLWMATGL FAPSAALAKE ISHFLKSRPH
1741 PIALDCQNRM QKLAKGGSRK YPPHLVEVEA IQHKTTQIFH KVFFPDNTDE AIEVDSATRA
1801 RDFCHKIGYR LGLKSSDGFS LFVKIKDKVL AVPESEFFFD YVRSLSDWVH TNHATQKDAT
1861 MIPINYQVYF MRKLWYNFVA GADPQADIIF HYHQESQKYL LGYHKTTKND VIELAALILR
1921 SMTKDGKNAP LAQIPQLLDE IIPKDSLKMY SASEWRKTIS NAYARIEHLK SDQAKIEFLN
1981 YICRWPTFGS AFFPVSQYSD LNLPDRLLLA INQTGVNIYH LDTKNLLVQY PFNVICNWTS
2041 GNTYFNMTVG NMLKGNEGKK LLLDTTVGYK MDDLLTSYIS LLISNQNNHP SKTREVAL
//