LOCUS CBK19448.2 1375 aa PRT CON 06-FEB-2024
DEFINITION Caenorhabditis elegans Myosin motor domain-containing
protein protein.
ACCESSION BX284606-2741
PROTEIN_ID CBK19448.2
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 17718942)
AUTHORS WormBase.
CONSRTM WormBase Consortium
JOURNAL Submitted (04-FEB-2024) to the INSDC. WormBase Group, European
Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email:
help@wormbase.org
REFERENCE 2 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
JOURNAL Submitted (03-MAR-2003) to the INSDC. Nematode Sequencing Project:
Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome
Institute at Washington University, St. Louis, MO 63110, USA.
REFERENCE 3 (bases 1 to 17718942)
AUTHORS Sulson J.E., Waterston R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282(5396), 2012-2018(1998).
COMMENT Annotated features correspond to WormBase release WS292.
Protein-coding gene structures below are the result of integration
and manual review of the following types of data: ab initio
predictions by Genefinder (P. Green and L. Hillier, pers. comm.);
alignments to published proteins and cDNAs; genome sequence
conservation with other nematodes (e.g. to C. briggsae using WABA:
Genome Res. 2000. 10:1115-1125); sequence features (such as
trans-splice and polyA sites).
Sources of data: large-scale EST projects of Yuji Kohara
(http://www.ddbj.nig.ac.jp/c-elegans/html/CE_INDEX.html); ORFeome
cloning project (http://worfdb.dfci.harvard.edu); RST large-scale
sequencing project (Genome Res. 2009. 19:2334-2342); IST library
(Science. 2004. 303:540-3); RT-PCR EST set (Ewing B. Green P. 2010
Unpublished); UTRome EST data submission (UTRome v1 Mangone M.
Piano F. 2009); TEC-RED data (PNAS 2004. 101:1650-1655); RNA Deep
sequencing data (454 read clusters - Makedonka Mitreva,
unpublished; Illumina sequence data, Genome Res. 2009. 19:657-66);
Numerous data sets from the modENCODE project (Science. 2010.
330:1775-87); Individual C. elegans Nucleotide Database
submissions; Personal communications with C. elegans researchers;
Non-Coding gene structures below are derived using the following
methods and data: ab initio prediction of tRNAs by tRNAscan-SE
(Nucl. Acids. Res., 25, 955-964); integration and appraisal of
miRNAs from miRBase (http://www.mirbase.org); integration and
appraisal of RFAM predictions (rfam.sanger.ac.uk); 21U-RNAs (Cell.
2006. 127:1193-1207); modENCODE data (Science. 2010. 330:1775-87);
manual curation of novel published ncRNAs from the literature.
FEATURES Qualifiers
source /organism="Caenorhabditis elegans"
/chromosome="X"
/strain="Bristol N2"
/mol_type="genomic DNA"
/db_xref="taxon:6239"
protein /transl_table=1
/gene="hum-4"
/locus_tag="CELE_F46C3.3"
/standard_name="F46C3.3d"
/note="Confirmed by transcript evidence"
/db_xref="GOA:D3YT13"
/db_xref="InterPro:IPR000299"
/db_xref="InterPro:IPR000857"
/db_xref="InterPro:IPR001452"
/db_xref="InterPro:IPR011993"
/db_xref="InterPro:IPR019748"
/db_xref="InterPro:IPR019749"
/db_xref="InterPro:IPR035963"
/db_xref="InterPro:IPR036028"
/db_xref="InterPro:IPR038185"
/db_xref="UniProtKB/TrEMBL:D3YT13"
/db_xref="WormBase:WBGene00002037"
intron_pos 67:1 (1/25)
intron_pos 226:0 (2/25)
intron_pos 291:0 (3/25)
intron_pos 331:2 (4/25)
intron_pos 348:0 (5/25)
intron_pos 375:2 (6/25)
intron_pos 418:0 (7/25)
intron_pos 476:0 (8/25)
intron_pos 513:0 (9/25)
intron_pos 553:1 (10/25)
intron_pos 632:1 (11/25)
intron_pos 672:0 (12/25)
intron_pos 713:2 (13/25)
intron_pos 798:0 (14/25)
intron_pos 848:0 (15/25)
intron_pos 884:1 (16/25)
intron_pos 977:2 (17/25)
intron_pos 1022:1 (18/25)
intron_pos 1054:0 (19/25)
intron_pos 1112:1 (20/25)
intron_pos 1166:0 (21/25)
intron_pos 1212:2 (22/25)
intron_pos 1260:1 (23/25)
intron_pos 1316:0 (24/25)
intron_pos 1350:0 (25/25)
BEGIN
1 MNFAPPPTFT YPQQMPMMQY VPVMMTSSMM TPSMMTPSMM PGQQIAMVPQ QMMMQPHFSY
61 VPQYPQIPQY CPPEPILSPQ SVRSEVPPMM APVMHDGHGS TRSRDYRIMK RGEVPSQYST
121 IRNMPVPEHG KDVDQFLDAV FDQVLSKDEQ RAAHFNSNQL ANTIKGGKLR PEGYYEPPVQ
181 TYSPVPPRYP TLRRVDDSPL RSRAKSLPRI ISPRHEHFVR RPHSRNSYSN ESTSSDDQMN
241 YRTRSRERSL PRFHSNNGYN YDPSQPVYMM PVQMNGHGEM ILLSPVASEH KAQSRHRTHD
301 RSHRHHVPSG VERYMAKRSP SVDILKPPMS RRTPDAMVEQ TYVRPHLAQS PVGRQTSRFE
361 EFSALPRGDS RARERMENPL LARQIPRAYP YQNGNVVPPP PSSYRAPSPA PTSGDRRGLN
421 RLPQESYTEP AVKNTKNNSE YLSPHRFNLD EQKAVIRHEK ETAKNAINML SDRLRKLPPP
481 VDNVRLIRPI TPAQPPITQS PVPSEPVVVR TPSPVPQPTP PPPPPPVREE WVIRDSVERD
541 PVTQGRIRGS FRKEPLVPQP PRPPVVAEKP AVKFVKAPWK LTIRKEMFYP GEVLNDIQII
601 DQVFAQIVED CKKSYPYRIR EQDRKQVETV LRQYEIPPSD LNNQSNIHPD VKVAVIELAR
661 LWPLYFNQVY EVVEKRPDES VSTIFAISEH GIRLIVHTPH DLENPLKIQD FFPFETIADV
721 SLEANDILSV HVRHEDEENA YSAVRIKTNQ APQIKKTLDR CLSGGVVPKR KFVRALEDYV
781 TSEVNHLSFK QGDVIELLQE PEGETPPVGN WLYGKIENRF GFLLAQYVDS TDGDNVPPIR
841 HETSEDRDER VRFFDDEVPF SSERYTMIDF ATKYFRKPKD KKKQETWAWE DISQIVRFSE
901 KPISQSLLAD LGNEESKYAV ETFHAIMKFM GDEPLKKSES MTDVVFKVLL ICHRQPTLRD
961 EVYCQLIKQT TSNISQKPNS ALRAWRLLTI ITAYFPSSLT LKPYVLQYLG DNADEWQRPF
1021 HGTARICQTN MIQTFKYGGR KVLLNALEVQ QITDGCQLRR QAFYISKDHN VSQTLRPITV
1081 AEEMIQELCN LLNVRSLHEQ QEFSLCYTVG KDKHLNYCKN DNYLMDIITE SEHKKLPFQF
1141 YLKRTVWVHP LRYDNAAYID SMFDQVIDDY LRGSLISTNS LGQLTAATTE EIIKLAAYLF
1201 LLLPDNPKGL NAKTLPQIVP KSVIEPKHRH QEEMVTRISR QLKMFGGRMR PAEAKSHFLE
1261 LLSTWPTFGV LHYRLKSVVE NGHQLPEVIL TINKSGIQLL QPKSKEVFKE RNYDQIVSVE
1321 SIRKTAYKIV RLVINTMQGE ETLDIKTDEA DEISHLIGQY MFVTGGAEER GSTEL
//